RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 NRP1O14786 923 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SMPD1P17405 629 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 APLP1P51693 650 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 LIPEQ05469 1076 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SYTL3Q4VX76 610 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM91A1Q658Y4 838 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 RETSATQ6NUM9 610 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 KLHDC10Q6PID8 442 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SPATA19Q7Z5L4 167 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PRRT2Q7Z6L0 340 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM135Q86UB9 458 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 RNF217Q8TC41 542 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 BORCS5Q969J3 196 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 FCRL3Q96P31 734 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 FAM126AQ9BYI3 521 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ALG2Q9H553 416 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ZFP14Q9HCL3 533 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TXNRD2Q9NNW7 524 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ATAD3AQ9NVI7 634 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 GDAP2Q9NXN4 497 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 NRAPQ86VF7 1730 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CITO14578 2027 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 H3BSA7 217 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 DNAJA2O60884 412 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 DLGAP3O95886 979 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ANXA6P08133 673 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ATP5C1P36542 298 aaKnown RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 GMPRP36959 345 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 RPS9P46781 194 aaKnown RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SLC5A3P53794 718 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PITX1P78337 314 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CLCQ05315 142 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 LCP2Q13094 533 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TUSC3Q13454 348 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CCNIQ14094 377 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 DGUOKQ16854 277 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TRIM60Q495X7 471 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ARHGAP36Q6ZRI8 547 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CCDC103Q8IW40 242 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 TMEM132CQ8N3T6 1108 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SVOPQ8N4V2 548 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 OR7A2PQ8NGA2 310 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 STYXQ8WUJ0 223 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 KCTD13Q8WZ19 329 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SH3KBP1Q96B97 665 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 ACBD6Q9BR61 282 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 RIBC2Q9H4K1 309 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 BPIFA1Q9NP55 256 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 PNMA8BQ9ULN7 279 aaPredicted RBP8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 SH3BP1Q9Y3L3 701 aa8.2□□□□□ -1.1
PRKAB1-207ENST00000542698 CAPN14A8MX76 684 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 FFAR3O14843 346 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PIP5K1BO14986 540 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 GPR42O15529 346 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RGS5O15539 181 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OR6B1O95007 311 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 UMPSP11172 480 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RHOQP17081 205 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 IMPDH1P20839 514 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PAX3P23760 479 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 IL4RP24394 825 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 TPP2P29144 1249 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ATP6V1E1P36543 226 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 EIF2B2P49770 351 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ELAVL2Q12926 359 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 NR1D2Q14995 579 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 STEAP4Q687X5 459 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 DLK2Q6UY11 383 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RNF180Q86T96 592 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RALGPS2Q86X27 583 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RTL3Q8N8U3 475 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 DCBLD1Q8N8Z6 715 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OR4K2Q8NGD2 314 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MOCOSQ96EN8 888 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 CDK5RAP1Q96SZ6 601 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 SMPD4Q9NXE4 827 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PLK2Q9NYY3 685 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MAGEL2Q9UJ55 1249 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 A0A1W2PQH9 124 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MGAT4DA6NG13 374 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 UBXN8O00124 270 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ZBTB14O43829 449 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 RPP40O75818 363 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ALDH1A2O94788 518 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OTCP00480 354 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 EDN1P05305 212 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MBL2P11226 248 aaPredicted RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 PROZP22891 400 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 EDNRBP24530 442 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 CD52P31358 61 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 CCR10P46092 362 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 POLR2JP52435 117 aaKnown RBP8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ARHGEF6Q15052 776 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 MAPK11Q15759 364 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 CTC1Q2NKJ3 1217 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ZNF621Q6ZSS3 439 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 ADAMTSL2Q86TH1 951 aa8.19□□□□□ -1.1
PRKAB1-207ENST00000542698 OFCC1Q8IZS5 231 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms