RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 SCAIQ8N9R8 606 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 LILRB1Q8NHL6 650 aaPredicted RBP5.31□□□□□ -1.56
CIT-211ENST00000541841 FAM110DQ8TAY7 271 aaPredicted RBP5.31□□□□□ -1.56
CIT-211ENST00000541841 SETD6Q8TBK2 473 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 WASF1Q92558 559 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 MR1Q95460 341 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 VCPIP1Q96JH7 1222 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 CCDC114Q96M63 670 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 CINPQ9BW66 212 aaPredicted RBP5.31□□□□□ -1.56
CIT-211ENST00000541841 NUF2Q9BZD4 464 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 HRH4Q9H3N8 390 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 MLXIPLQ9NP71 852 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 TMEM248Q9NWD8 314 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 ADPRHL2Q9NX46 363 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 ARHGEF38Q9NXL2 777 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 ARL15Q9NXU5 204 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 DLGAP2Q9P1A6 1054 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 NLKQ9UBE8 527 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 TUBE1Q9UJT0 475 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 SOGA1O94964 1423 aa5.31□□□□□ -1.56
CIT-211ENST00000541841 ZMYM2Q9UBW7 1377 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 DNMBPQ6XZF7 1577 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 A0A1W2PRG0 241 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 DDX39AO00148 427 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 SPRY1O43609 319 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 STRNO43815 780 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 HS6ST1O60243 411 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 NKX2-2O95096 273 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 CTSAP10619 480 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 PSG1P11464 419 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 DUSP1P28562 367 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 TKTP29401 623 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 HOXC8P31273 242 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 TCF7P36402 384 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 PRKCIP41743 596 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 CLCN3P51790 818 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 HSD17B7P56937 341 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 YBEYP58557 167 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 ACTN3Q08043 901 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 RNPS1Q15287 305 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 EDRF1Q3B7T1 1238 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 ARL13AQ5H913 290 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 TXNDC8Q6A555 127 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 CFAP77Q6ZQR2 320 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 OTOAQ7RTW8 1153 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 ANKRD13BQ86YJ7 626 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 TDRPQ86YL5 185 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 LAS2Q8IYD9 372 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 MMP21Q8N119 569 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 TEX9Q8N6V9 391 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 FIBINQ8TAL6 211 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 KCNE4Q8WWG9 221 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
CIT-211ENST00000541841 ZNF622Q969S3 477 aaKnown RBP eCLIP5.3□□□□□ -1.567e-6■■■■□ 22.7
CIT-211ENST00000541841 FAM162AQ96A26 154 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 PTERQ96BW5 349 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 LINC00615Q96LM1 132 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 OR2A14Q96R47 310 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 SYT17Q9BSW7 474 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 KIFC3Q9BVG8 833 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 FUT8Q9BYC5 575 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 IFIH1Q9BYX4 1025 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.3□□□□□ -1.56
CIT-211ENST00000541841 PFDN4Q9NQP4 134 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 PDRG1Q9NUG6 133 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 DDX43Q9NXZ2 648 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 FZD4Q9ULV1 537 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 KLHL20Q9Y2M5 609 aa5.3□□□□□ -1.56
CIT-211ENST00000541841 POLA1P09884 1462 aaPredicted RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 TARBP1Q13395 1621 aaKnown RBP5.3□□□□□ -1.56
CIT-211ENST00000541841 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 LOC102723996A0A087X1L8 192 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 OR6C68A6NDL8 312 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 A6NL46 340 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 H3BNX3 289 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 KINO60870 393 aaKnown RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 KERAO60938 352 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 HEXAP06865 529 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 TMEM191BP0C7N4 346 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 HOXB9P17482 250 aaPredicted RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 HOXB6P17509 224 aaKnown RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 SCP2P22307 547 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 PON1P27169 355 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 NDUFS1P28331 727 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 KIF5BP33176 963 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 PNLIPRP2P54317 469 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 CSE1LP55060 971 aaKnown RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 IL1RL1Q01638 556 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 LASP1Q14847 261 aaKnown RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 PPP2R5BQ15173 497 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 HYAL4Q2M3T9 481 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 LEXMQ3ZCV2 418 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 TTC31Q49AM3 519 aaPredicted RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 SLC9C1Q4G0N8 1177 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 ZRANB3Q5FWF4 1079 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 CXorf66Q5JRM2 361 aaPredicted RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 CST9LP1Q5W188 147 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 IL20RBQ6UXL0 311 aa5.29□□□□□ -1.56
CIT-211ENST00000541841 RBPMS2Q6ZRY4 209 aaKnown RBP5.29□□□□□ -1.56
CIT-211ENST00000541841 BTN2A1Q7KYR7 527 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms