RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 CCDC168Q8NDH2 2452 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 CTAGE9A4FU28 777 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 RNF225M0QZC1 329 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 TOR1BO14657 336 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 POLR1CO15160 346 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 LRCH4O75427 683 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 CLDN11O75508 207 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ZMPSTE24O75844 475 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 IGLV3-25P01717 112 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 CYLC1P35663 651 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 NOP2P46087 812 aaKnown RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 SERPINH1P50454 418 aaKnown RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 CLCN6P51797 869 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 CDH4P55283 916 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ITGA1P56199 1179 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ARF5P84085 180 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 FOXM1Q08050 763 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 RAPSNQ13702 412 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 NR1D2Q14995 579 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ZNF569Q5MCW4 686 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ATXN7L2Q5T6C5 722 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 FBXO38Q6PIJ6 1188 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 SLC30A9Q6PML9 568 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 TMCO3Q6UWJ1 677 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 LCLAT1Q6UWP7 414 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 C6orf15Q6UXA7 325 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 SLC9A9Q8IVB4 645 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 PCDH20Q8N6Y1 951 aaKnown RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 DCAF4L2Q8NA75 395 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 OR56A4Q8NGH8 313 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 GOLGA5Q8TBA6 731 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 WDR24Q96S15 920 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 NUDT9Q9BW91 350 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 LGR4Q9BXB1 951 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ING2Q9H160 280 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 TMEM8AQ9HCN3 771 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 FBXO8Q9NRD0 319 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 DDIT4Q9NX09 232 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 RAB20Q9NX57 234 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 TAAR2Q9P1P5 351 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 CAPN11Q9UMQ6 739 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 NTNG1Q9Y2I2 539 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 FRMD4BQ9Y2L6 1034 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 ZNF451Q9Y4E5 1061 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 MRFAP1Q9Y605 127 aa9.77□□□□□ -0.85
CHFR-220ENST00000541817 EPN1Q9Y6I3 576 aaPredicted RBP9.77□□□□□ -0.85
CHFR-220ENST00000541817 MDC1Q14676 2089 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 ZNF185O15231 689 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 ATP8B1O43520 1251 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 PRICKLE3O43900 615 aaPredicted RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 DPM1O60762 260 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 PAGE1O75459 146 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 KIAA0754O94854 1291 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 FBXO21O94952 628 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 IPO7O95373 1038 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 CD160O95971 181 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 H2AFXP16104 143 aaPredicted RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 STK4Q13043 487 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 NME3Q13232 169 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 EIF4EBP2Q13542 120 aaPredicted RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 DNASE1L3Q13609 305 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 TEX35Q5T0J7 233 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 NAGSQ8N159 534 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 KRT222Q8N1A0 295 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 GUF1Q8N442 669 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 KIAA0895Q8NCT3 520 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 FDCSPQ8NFU4 85 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 CT55Q8WUE5 264 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 PNPLA2Q96AD5 504 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 STAMBPL1Q96FJ0 436 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 AHCYL2Q96HN2 611 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 NAPGQ99747 312 aaPredicted RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 ZPBPQ9BS86 351 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 ANLNQ9NQW6 1124 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 COPG2Q9UBF2 871 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 CDC23Q9UJX2 597 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 PLEKHM1Q9Y4G2 1056 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 PCDHGA9Q9Y5G4 932 aaKnown RBP9.76□□□□□ -0.85
CHFR-220ENST00000541817 ST14Q9Y5Y6 855 aa9.76□□□□□ -0.85
CHFR-220ENST00000541817 HEATR9A2RTY3 570 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 FUCA1P04066 466 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 KRT13P13646 458 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 CCNB1P14635 433 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 CCR1P32246 355 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 MAN1A1P33908 653 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 ACVRL1P37023 503 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 MAPK9P45984 424 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 GPR3P46089 330 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 PMS1P54277 932 aaKnown RBP9.75□□□□□ -0.85
CHFR-220ENST00000541817 ZBED6P86452 979 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 LRRC63Q05C16 580 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 CUL2Q13617 745 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 CHRNA6Q15825 494 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 CLPPQ16740 277 aaPredicted RBP9.75□□□□□ -0.85
CHFR-220ENST00000541817 MIIPQ5JXC2 388 aa9.75□□□□□ -0.85
CHFR-220ENST00000541817 PAPD7Q5XG87 772 aaKnown RBP9.75□□□□□ -0.85
CHFR-220ENST00000541817 KRT39Q6A163 491 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms