RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 POLR3BQ9NW08 1133 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SLC8A2Q9UPR5 921 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 FADS3Q9Y5Q0 445 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 RAD54BQ9Y620 910 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ARL5AQ9Y689 179 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 DGKBQ9Y6T7 804 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ASPDHA6ND91 283 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ACOX3O15254 700 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZBTB11O95625 1053 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 WARSP23381 471 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ADSLP30566 484 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CCR1P32246 355 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 RXRGP48443 463 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 NANOGP8Q6NSW7 305 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 C8orf82Q6P1X6 216 aaPredicted RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 BBS5Q8N3I7 341 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 SMYD1Q8NB12 490 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 KATNBL1Q9H079 304 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 AGPAT4Q9NRZ5 378 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 CNOT11Q9UKZ1 510 aaKnown RBP10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 FAM50BQ9Y247 325 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 DERAQ9Y315 318 aa10.36□□□□□ -0.75
CDC42SE1-207ENST00000540998 ASB14A6NK59 587 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 ANGPT2O15123 496 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 NCAM2O15394 837 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 FUCA1P04066 466 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 TCF3P15923 654 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 IL7RP16871 459 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 SH3BGRP55822 239 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 TIGD2Q4W5G0 525 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 AGAP9Q5VTM2 703 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 RANBP10Q6VN20 620 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 LINC00523Q86TU6 105 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 LRRTM3Q86VH5 581 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 ANKFN1Q8N957 763 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR13C4Q8NGS5 318 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 KCTD13Q8WZ19 329 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 CDK15Q96Q40 435 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 TSPYL2Q9H2G4 693 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 INIPQ9NRY2 104 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 CCM2LQ9NUG4 571 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 UTS2RQ9UKP6 389 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 SARDHQ9UL12 918 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 PADI4Q9UM07 663 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 AAR2Q9Y312 384 aaKnown RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 VWA7Q9Y334 891 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 ASB1Q9Y576 335 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 CNTN5O94779 1100 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 BMP2P12643 396 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 SHMT2P34897 504 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 SCNN1GP51170 649 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 UFM1P61960 85 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 POU4F1Q01851 419 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 CBX3Q13185 183 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 LAPTM5Q13571 262 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 FRG1Q14331 258 aaKnown RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 GALNT3Q14435 633 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 UGT3A1Q6NUS8 523 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 ITIH5Q86UX2 942 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 TBC1D15Q8TC07 691 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 UHRF1Q96T88 793 aaPredicted RBP10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 EFHD1Q9BUP0 239 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 PCDH12Q9NPG4 1184 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 PFDN4Q9NQP4 134 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 RGS18Q9NS28 235 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 AASSQ9UDR5 926 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 POLG2Q9UHN1 485 aa10.35□□□□□ -0.75
CDC42SE1-207ENST00000540998 A0A087WXM4 84 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 A0A087X1B8 175 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SH3PXD2BA1X283 911 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 K7EPI3 171 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GABRDO14764 452 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPR39O43194 453 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 POMCP01189 267 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 HMGB2P26583 209 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 HADHAP40939 763 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 PSMD8P48556 350 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GSK3BP49841 420 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 DNAJB13P59910 316 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ESRRGP62508 458 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 RPS6KA2Q15349 733 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF792Q3KQV3 632 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZBED5Q49AG3 693 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 CYBRD1Q53TN4 286 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 PIWIL3Q7Z3Z3 882 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 DPP9Q86TI2 863 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 CILP2Q8IUL8 1156 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 OR10Q1Q8NGQ4 319 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 LRRC58Q96CX6 371 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ITCHQ96J02 903 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 UBXN10Q96LJ8 280 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FCRL5Q96RD9 977 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 RTP3Q9BQQ7 232 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 GPATCH1Q9BRR8 931 aaKnown RBP10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 ZNF408Q9H9D4 720 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 FANCEQ9HB96 536 aa10.34□□□□□ -0.75
CDC42SE1-207ENST00000540998 SELENONQ9NZV5 590 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms