RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 ZWINTO95229 277 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 LDOC1O95751 146 aaPredicted RBP8.43□□□□□ -1.06
CHD4-208ENST00000540960 MT-ND3P03897 115 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 SHBGP04278 402 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 CCNB1P14635 433 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 PAMP19021 973 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 PRKCHP24723 683 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 DDX6P26196 483 aaKnown RBP eCLIP8.43□□□□□ -1.06
CHD4-208ENST00000540960 ELK3P41970 407 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MAGEA3P43357 314 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 INSM1Q01101 510 aaPredicted RBP8.43□□□□□ -1.06
CHD4-208ENST00000540960 SLC14A2Q15849 920 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 ZNF77Q15935 545 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 C5orf22Q49AR2 442 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 PRAMEF14Q5SWL7 426 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 AFMIDQ63HM1 303 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 ADGRD1Q6QNK2 874 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 CHST9Q7L1S5 443 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 NLRP9Q7RTR0 991 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MIB1Q86YT6 1006 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 TRIM42Q8IWZ5 723 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 ANKS4BQ8N8V4 417 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 DCBLD1Q8N8Z6 715 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 GLIS1Q8NBF1 620 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 FOXJ1Q92949 421 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 GRAMD1AQ96CP6 724 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 CNDP2Q96KP4 475 aaKnown RBP8.43□□□□□ -1.06
CHD4-208ENST00000540960 FCRL5Q96RD9 977 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 SELENOSQ9BQE4 189 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MAGEB5Q9BZ81 275 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MAGEH1Q9H213 219 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 CCDC134Q9H6E4 229 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 NMUR1Q9HB89 426 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 ASCL3Q9NQ33 180 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 LSM7Q9UK45 103 aaKnown RBP8.43□□□□□ -1.06
CHD4-208ENST00000540960 HS3ST4Q9Y661 456 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 MAD1L1Q9Y6D9 718 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 FAM169AQ9Y6X4 670 aa8.43□□□□□ -1.06
CHD4-208ENST00000540960 NUMA1Q14980 2115 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ZNF840PA6NDX5 716 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SMIM23A6NLE4 172 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 POC1B-GALNT4F8VUJ3 575 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 GOLGA8MH3BSY2 632 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 DFFAO00273 331 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 EBAG9O00559 213 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 NDUFAB1O14561 156 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 PRPF4O43172 522 aaKnown RBP eCLIP8.42□□□□□ -1.06
CHD4-208ENST00000540960 CACNG3O60359 315 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ACSL4O60488 711 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ZNF217O75362 1048 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 TMEM63AO94886 807 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 KAT7O95251 611 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 F11P03951 625 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SNRPAP09012 282 aaKnown RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 C1SP09871 688 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 BRAFP15056 766 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ATF6P18850 670 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CA4P22748 312 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 PTPN3P26045 913 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CDC25CP30307 473 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 LSP1P33241 339 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SLCO1A2P46721 670 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 POLD2P49005 469 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CDH4P55283 916 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 GABREP78334 506 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 PITX1P78337 314 aaPredicted RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 KDSRQ06136 332 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 IL10RBQ08334 325 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 WASHC5Q12768 1159 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CDH17Q12864 832 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 MPP3Q13368 585 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 UGP2Q16851 508 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 LONRF1Q17RB8 773 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 RAB6CQ53S08 254 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 MS4A13Q5J8X5 152 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 FNBP1LQ5T0N5 605 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 MARC1Q5VT66 337 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ANKRD22Q5VYY1 191 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CASC4Q6P4E1 433 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SETD3Q86TU7 594 aaPredicted RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 LCA5Q86VQ0 697 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 CHSY1Q86X52 802 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 KLHDC8BQ8IXV7 354 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ZNF567Q8N184 647 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 KIAA1958Q8N8K9 716 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 DNAAF3Q8N9W5 541 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ACMSDQ8TDX5 336 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 FBF1Q8TES7 1133 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 MAML1Q92585 1016 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 MRPS31Q92665 395 aaKnown RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 RPRD1AQ96P16 312 aaPredicted RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 IL12RB2Q99665 862 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 SEMA3CQ99985 751 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 GPR174Q9BXC1 333 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 IQCGQ9H095 443 aaKnown RBP8.42□□□□□ -1.06
CHD4-208ENST00000540960 RAB6CQ9H0N0 254 aa8.42□□□□□ -1.06
CHD4-208ENST00000540960 KIF9Q9HAQ2 790 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms