RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PCDHAC1Q9H158 963 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 UPF3AQ9H1J1 476 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 TMEM134Q9H6X4 195 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NOL11Q9H8H0 719 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 SLC28A3Q9HAS3 691 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ITM2CQ9NQX7 267 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SYBUQ9NX95 663 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 COPG1Q9Y678 874 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 COL4A4P53420 1690 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 EP300Q09472 2414 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 A0A0A0MRY4 1105 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TCAF2A6NFQ2 919 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SAC3D1A6NKF1 404 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SOBPA7XYQ1 873 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 CFAP99D6REC4 459 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 H3BUI4 141 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ARHGAP33O14559 1287 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NRP1O14786 923 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GRID2O43424 1007 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 AKAP10O43572 662 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GABBR2O75899 941 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 DCKP27707 260 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GRIA4P48058 902 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 KPNA2P52292 529 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 PRKAA2P54646 552 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NME5P56597 212 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 GBE1Q04446 702 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CLCQ05315 142 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 LRRC74AQ0VAA2 488 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TRAP1Q12931 704 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 MAPRE2Q15555 327 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 KYAT1Q16773 422 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 RGS21Q2M5E4 152 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 NHSL2Q5HYW2 709 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 FBXO47Q5MNV8 452 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CELF3Q5SZQ8 465 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 LIPMQ5VYY2 423 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 PTRHD1Q6GMV3 140 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 HMBOX1Q6NT76 420 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 DCLRE1AQ6PJP8 1040 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 MPZL3Q6UWV2 235 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CES3Q6UWW8 571 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CYP2R1Q6VVX0 501 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 STRA8Q7Z7C7 330 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 RALGPS2Q86X27 583 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 NATD1Q8N6N6 113 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ANKFN1Q8N957 763 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 COLGALT1Q8NBJ5 622 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ADAMTS16Q8TE57 1224 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 ARNTL2Q8WYA1 636 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TFAP2CQ92754 450 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SDCCAG3Q96C92 435 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 CELF6Q96J87 481 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 SPATA13Q96N96 652 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 UHRF1Q96T88 793 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 EIF2AQ9BY44 585 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 UNC93B1Q9H1C4 597 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 SOX17Q9H6I2 414 aaPredicted RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 OXSMQ9NWU1 459 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 DUS2Q9NX74 493 aaKnown RBP5.24□□□□□ -1.57
PROM1-220ENST00000540805 KIAA1257Q9ULG3 409 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 REV3LO60673 3130 aa5.24□□□□□ -1.57
PROM1-220ENST00000540805 TCRBV3S1A0A5B6 114 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 ZNF839A8K0R7 811 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 KCNU1A8MYU2 1149 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 AP3B1O00203 1094 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 SOCS2O14508 198 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 AXIN1O15169 862 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 PAPSS1O43252 624 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 CNOT3O75175 753 aaKnown RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 TIPRLO75663 272 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 IL18RAPO95256 599 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 HIST1H2AGP0C0S8 130 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 CHRNB1P11230 501 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 HOXD8P13378 290 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 CKMT2P17540 419 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 TFEBP19484 476 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 HIST1H2ADP20671 130 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 MYF6P23409 242 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 PBLDP30039 288 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 CCR10P46092 362 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 SLC11A2P49281 568 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 NEK2P51955 445 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 PLIN5Q00G26 463 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 STX5Q13190 355 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 RAB39AQ14964 217 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 SYTL3Q4VX76 610 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 ARL13AQ5H913 290 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 MARCH8Q5T0T0 291 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 CCSAPQ6IQ19 270 aaPredicted RBP5.23□□□□□ -1.57
PROM1-220ENST00000540805 LRRC8EQ6NSJ5 796 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 ZPBP2Q6X784 338 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 CHSY3Q70JA7 882 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 IFNEQ86WN2 208 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 PACRGLQ8N7B6 248 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 RDH11Q8TC12 318 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 NACC2Q96BF6 587 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 HIST1H2AHQ96KK5 128 aa5.23□□□□□ -1.57
PROM1-220ENST00000540805 IL12RB2Q99665 862 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms