RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 CYTH1Q15438 398 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 TRIP10Q15642 601 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 HECTD3Q5T447 861 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 SDCCAG8Q86SQ7 713 aaPredicted RBP20.91■□□□□ 0.94
LSM14A-202ENST00000540746 PTGR2Q8N8N7 351 aaPredicted RBP20.91■□□□□ 0.94
LSM14A-202ENST00000540746 OR4K2Q8NGD2 314 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 RMDN1Q96DB5 314 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 KLHL4Q9C0H6 718 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 RNF38Q9H0F5 515 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 ZDHHC7Q9NXF8 308 aa20.91■□□□□ 0.94
LSM14A-202ENST00000540746 FBP2O00757 339 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CASQ2O14958 399 aaPredicted RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CLDN11O75508 207 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 AQP4P55087 323 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 OR52E8Q6IFG1 317 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 LARP4Q71RC2 724 aaKnown RBP eCLIP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 BBS5Q8N3I7 341 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 AFAP1L2Q8N4X5 818 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CAPNS2Q96L46 248 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 ATOH8Q96SQ7 321 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 TDRD1Q9BXT4 1180 aaKnown RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 FBRSL1Q9HCM7 1045 aaKnown RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 IKZF3Q9UKT9 509 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 ANKRD12Q6UB98 2062 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 MKI67P46013 3256 aaKnown RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CBX4O00257 560 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 HOXA2O43364 376 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 TSPAN3O60637 253 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 F11P03951 625 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 UBTFL6P0CB48 400 aaPredicted RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CDKN1CP49918 316 aaPredicted RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 SQLEQ14534 574 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 PTPRRQ15256 657 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 GSTA3Q16772 222 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 KLHDC10Q6PID8 442 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 FAM156AQ8NDB6 213 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 LPGAT1Q92604 370 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 NSUN5Q96P11 429 aaKnown RBP20.9■□□□□ 0.94
LSM14A-202ENST00000540746 POPDC3Q9HBV1 291 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 CCDC167Q9P0B6 97 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 PCDHGC4Q9Y5F7 938 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 PCDHGA7Q9Y5G6 932 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 ANAPC1Q9H1A4 1944 aa20.9■□□□□ 0.94
LSM14A-202ENST00000540746 UBA6A0AVT1 1052 aaPredicted RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 PSMD12O00232 456 aaPredicted RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 PITPNM1O00562 1244 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 ACOT8O14734 319 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 SMIM24O75264 130 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 CDK14O94921 469 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 CRTAMO95727 393 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 HOXB8P17481 243 aaPredicted RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 ATXN3P54252 364 aaPredicted RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 MRPS22P82650 360 aaKnown RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 PDAP1Q13442 181 aaKnown RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 FASTKQ14296 549 aaKnown RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 PFKFB4Q16877 469 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 AGKQ53H12 422 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 C16orf59Q7L2K0 433 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 GLT6D1Q7Z4J2 308 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 NR1H4Q96RI1 486 aaPredicted RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 AGO1Q9UL18 857 aaKnown RBP20.89■□□□□ 0.94
LSM14A-202ENST00000540746 PSMD13Q9UNM6 376 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 FAM50BQ9Y247 325 aa20.89■□□□□ 0.94
LSM14A-202ENST00000540746 ILVBLA1L0T0 632 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 MAGEA13PA6NCF6 341 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 C2orf78A6NCI8 922 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 MAP3K13O43283 966 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 RHOCP08134 193 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 IRF1P10914 325 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 ME2P23368 584 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 FMO4P31512 558 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 TUFMP49411 452 aaKnown RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 USP41Q3LFD5 358 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PAQR3Q6TCH7 311 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 LRRC43Q8N309 656 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PCDH20Q8N6Y1 951 aaKnown RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PHC3Q8NDX5 983 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PDZD8Q8NEN9 1154 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 BHLHE22Q8NFJ8 381 aaPredicted RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 OR9I1Q8NGQ6 314 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 RHEBL1Q8TAI7 183 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PPP2R3CQ969Q6 453 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 DDX50Q9BQ39 737 aaKnown RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 CLSTN3Q9BQT9 956 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 MRPL1Q9BYD6 325 aaKnown RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 RETREG1Q9H6L5 497 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 INTS10Q9NVR2 710 aaKnown RBP20.89■□□□□ 0.93
LSM14A-202ENST00000540746 GALPQ9UBC7 116 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 SCOCQ9UIL1 159 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 DNAJC15Q9Y5T4 150 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 PTGDR2Q9Y5Y4 395 aa20.89■□□□□ 0.93
LSM14A-202ENST00000540746 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.88■□□□□ 0.93
LSM14A-202ENST00000540746 A0A0U1RQS6 177 aa20.88■□□□□ 0.93
LSM14A-202ENST00000540746 RNASEH1O60930 286 aaKnown RBP20.88■□□□□ 0.93
LSM14A-202ENST00000540746 CD160O95971 181 aa20.88■□□□□ 0.93
LSM14A-202ENST00000540746 FOXA1P55317 472 aa20.88■□□□□ 0.93
LSM14A-202ENST00000540746 ZNF177Q13360 481 aaPredicted RBP20.88■□□□□ 0.93
LSM14A-202ENST00000540746 LRP8Q14114 963 aa20.88■□□□□ 0.93
LSM14A-202ENST00000540746 TAF1AQ15573 450 aaPredicted RBP20.88■□□□□ 0.93
LSM14A-202ENST00000540746 CXorf57Q6NSI4 855 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms