RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RFLNAQ6ZTI6 216 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 MICALCLQ6ZW33 695 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 RABEPKQ7Z6M1 372 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 RGL4Q8IZJ4 473 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 CBARPQ8N350 705 aaPredicted RBP16.72■□□□□ 0.27
UBC-208ENST00000540700 ADAMTS14Q8WXS8 1223 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 KLK6Q92876 244 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 RAB7BQ96AH8 199 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 HSPA12BQ96MM6 686 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 DNAAF2Q9NVR5 837 aaKnown RBP16.72■□□□□ 0.27
UBC-208ENST00000540700 RPL26L1Q9UNX3 145 aaKnown RBP16.72■□□□□ 0.27
UBC-208ENST00000540700 COQ6Q9Y2Z9 468 aa16.72■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3DA0A087WVF3 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3IA0A087WXS9 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3EA0A087X179 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3KA0A087X1G2 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 A0A1W2PQ67 120 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3FA6NER0 549 aaPredicted RBP16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3LB9A6J9 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 MMP20O60882 483 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 APRTP07741 180 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 C1SP09871 688 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3HP0C7X1 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 CA4P22748 312 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 XPAP23025 273 aaPredicted RBP16.71■□□□□ 0.27
UBC-208ENST00000540700 MAT2AP31153 395 aaKnown RBP16.71■□□□□ 0.27
UBC-208ENST00000540700 VIPR1P32241 457 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 LIG3P49916 1009 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 EPHB1P54762 984 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 ZNF284Q2VY69 593 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 RNASEH2BQ5TBB1 312 aaKnown RBP16.71■□□□□ 0.27
UBC-208ENST00000540700 KIAA0895LQ68EN5 471 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3GQ6DHY5 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3CQ6IPX1 549 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 LIPIQ6XZB0 460 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 KDM7AQ6ZMT4 941 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 NAXDQ8IW45 347 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TBC1D3Q8IZP1 549 aaPredicted RBP16.71■□□□□ 0.27
UBC-208ENST00000540700 PAF1Q8N7H5 531 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 NAT8LQ8N9F0 302 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 OR52K1Q8NGK4 314 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 RUNDC3BQ96NL0 473 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 LYSMD1Q96S90 227 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 FSD1LQ9BXM9 530 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 KDM4CQ9H3R0 1056 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 LRRC40Q9H9A6 602 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 PREBQ9HCU5 417 aa16.71■□□□□ 0.27
UBC-208ENST00000540700 TNRC6BQ9UPQ9 1833 aaKnown RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 IGLON5A6NGN9 336 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 GOLGA8CPA6NN73 597 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 DNALI1O14645 258 aaPredicted RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 WNT9AO14904 365 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 HEXIM1O94992 359 aaKnown RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 FSBPO95073 299 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 PCDH8O95206 1070 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 CLDN7O95471 211 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 C6P13671 934 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 HLA-DPA1P20036 260 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 SUOXP51687 545 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 POLR2LP62875 67 aaKnown RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 SFSWAPQ12872 951 aaKnown RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 TRADDQ15628 312 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 LRRC66Q68CR7 880 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 ERAP2Q6P179 960 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 USP45Q70EL2 814 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 LYSMD3Q7Z3D4 306 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 HSD11B1LQ7Z5J1 315 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 TRIM69Q86WT6 500 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 PELI3Q8N2H9 469 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 TTC30BQ8N4P2 665 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 MMGT1Q8N4V1 131 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 BIRC7Q96CA5 298 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 LRRC1Q9BTT6 524 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 ADGRE3Q9BY15 652 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 TRIM31Q9BZY9 425 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 ARNT2Q9HBZ2 717 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 CASS4Q9NQ75 786 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 EIF2B3Q9NR50 452 aaKnown RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 ASIC3Q9UHC3 531 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 FEZ2Q9UHY8 353 aaPredicted RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 SHOC2Q9UQ13 582 aa16.7■□□□□ 0.26
UBC-208ENST00000540700 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
UBC-208ENST00000540700 MYLKQ15746 1914 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 CTAGE15A4D2H0 777 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 LRRC72A6NJI9 287 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 METTL12A8MUP2 240 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 BHMG1C9JSJ3 638 aaPredicted RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 RAD51BO15315 384 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 LATO43561 262 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 TSPAN6O43657 245 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 NDUFS2O75306 463 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 FGF1P05230 155 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 CTAGE8P0CG41 777 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 TPH1P17752 444 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 TPSB2P20231 275 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 MAOBP27338 520 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 RPL21P46778 160 aaKnown RBP16.69■□□□□ 0.26
UBC-208ENST00000540700 SLC7A5Q01650 507 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 PTSQ03393 145 aa16.69■□□□□ 0.26
UBC-208ENST00000540700 ELP6Q0PNE2 266 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms