RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GATA5Q9BWX5 397 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 MRPL9Q9BYD2 267 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 C6orf62Q9GZU0 229 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 ANKRD6Q9Y2G4 727 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 CXorf49A8MYA2 514 aaPredicted RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 HNRNPCL2B2RXH8 293 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 SYN3O14994 580 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 B4GALT3O60512 393 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 CRTAMO95727 393 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 LTA4HP09960 611 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 LBPP18428 481 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 CD86P42081 329 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ELAVL2Q12926 359 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 CDH18Q13634 790 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 DPYSQ14117 519 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PAFAH1B3Q15102 231 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 TRAF7Q6Q0C0 670 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 IL27RAQ6UWB1 636 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 CAND1Q86VP6 1230 aaKnown RBP10□□□□□ -0.81
TRAF1-202ENST00000540010 DCBLD1Q8N8Z6 715 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 RORBQ92753 470 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PLEKHG4BQ96PX9 1271 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ZBED2Q9BTP6 218 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ELOVL6Q9H5J4 265 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 PNPLA8Q9NP80 782 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 ZC4H2Q9NQZ6 224 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 POLG2Q9UHN1 485 aa10□□□□□ -0.81
TRAF1-202ENST00000540010 H7C4K7 107 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 IRAK2O43187 625 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SEC22BO75396 215 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SERPINH1P50454 418 aaKnown RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 CCNG1P51959 295 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 TBX4P57082 545 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 PM20D1Q6GTS8 502 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 PKN3Q6P5Z2 889 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SPESP1Q6UW49 350 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NECAB2Q7Z6G3 386 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 CASP10Q92851 521 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 TUBGCP5Q96RT8 1024 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 RIBC2Q9H4K1 309 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NOL6Q9H6R4 1146 aaKnown RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 ENTPD7Q9NQZ7 604 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SMPD4Q9NXE4 827 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 GMIPQ9P107 970 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 RSL24D1Q9UHA3 163 aaKnown RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 ANAPC2Q9UJX6 822 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 VPS9D1Q9Y2B5 631 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 DNAH12Q6ZR08 3092 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 KCNU1A8MYU2 1149 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NBNO60934 754 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 ZBTB11O95625 1053 aaPredicted RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 CYP2C18P33260 490 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 GLUD2P49448 558 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 OXCT1P55809 520 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 BRMS1LQ5PSV4 323 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 FUT10Q6P4F1 479 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 C11orf96Q7Z7L8 435 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 LDB1Q86U70 411 aaPredicted RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 MPP5Q8N3R9 675 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NXNL1Q96CM4 212 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 ZFYVE19Q96K21 471 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 EXOC2Q96KP1 924 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 PPM1HQ9ULR3 514 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 OR6C75A6NL08 312 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 CCL22O00626 93 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 DCLK1O15075 740 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 AMHP03971 560 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NR4A1P22736 598 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 HALP42357 657 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SLC11A2P49281 568 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 DSC1Q08554 894 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SCAPQ12770 1279 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NAB1Q13506 487 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 TMEM198Q66K66 360 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 OTOP3Q7RTS5 596 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 NPAS4Q8IUM7 802 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 OR8H2Q8N162 312 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 CDYL2Q8N8U2 506 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 MAB21L3Q8N8X9 362 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 SPPL2AQ8TCT8 520 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 GIPC3Q8TF64 312 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 EZH1Q92800 747 aaPredicted RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 MTFMTQ96DP5 389 aaKnown RBP9.99□□□□□ -0.81
TRAF1-202ENST00000540010 GPR62Q9BZJ7 368 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 RAD54BQ9Y620 910 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 USP3Q9Y6I4 520 aa9.99□□□□□ -0.81
TRAF1-202ENST00000540010 DHRS12A0PJE2 317 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ZBTB24O43167 697 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 ABCB1P08183 1280 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 LINC00032P0C843 101 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 SLC11A1P49279 550 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 CSTF3Q12996 717 aaKnown RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 MSLNQ13421 630 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 POLD3Q15054 466 aaPredicted RBP9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TTLL9Q3SXZ7 439 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 TNFAIP8L3Q5GJ75 292 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 PITRM1Q5JRX3 1037 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 UGT3A1Q6NUS8 523 aa9.98□□□□□ -0.81
TRAF1-202ENST00000540010 CD300LGQ6UXG3 332 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms