RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 XYLT1Q86Y38 959 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FBXW8Q8N3Y1 598 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CERS5Q8N5B7 392 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 OR52K2Q8NGK3 314 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 MRPS33Q9Y291 106 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ASF1AQ9Y294 204 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 MRC1P22897 1456 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FFAR3O14843 346 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 GPR42O15529 346 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LINC00032P0C843 101 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 IDH2P48735 452 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PTP4A2Q12974 167 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CTBP1Q13363 440 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ECM1Q16610 540 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC24A5Q71RS6 500 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ARMC8Q8IUR7 673 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PIK3C3Q8NEB9 887 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 TSPAN14Q8NG11 270 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PURBQ96QR8 312 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LOC100506127A0A0U1RQW1 187 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 KHDRBS3O75525 346 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PTGES3Q15185 160 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FAM110CQ1W6H9 321 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FAM151BQ6UXP7 276 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PACS1Q6VY07 963 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 RNF44Q7L0R7 432 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 KBTBD8Q8NFY9 601 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 KIFC1Q9BW19 673 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 NXF3Q9H4D5 531 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 RNF19AQ9NV58 838 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SAMHD1Q9Y3Z3 626 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 HBS1LQ9Y450 684 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SYN3O14994 580 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LRIG2O94898 1065 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CCNCP24863 283 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ACTR3P61158 418 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ATP1A4Q13733 1029 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 UBAP2LQ14157 1087 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ZSWIM7Q19AV6 140 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 RPTNQ6XPR3 784 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 OAFQ86UD1 273 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CDYL2Q8N8U2 506 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 EEF1AKMT1Q8WVE0 214 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC44A1Q8WWI5 657 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 KLRG1Q96E93 195 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SGK2Q9HBY8 427 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CCNB1IP1Q9NPC3 277 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PIK3C2AO00443 1686 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 MYH4Q9Y623 1939 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LCA5LO95447 670 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 NDST2P52849 883 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ELP6Q0PNE2 266 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CAPN13Q6MZZ7 669 aaPredicted RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC25A24Q6NUK1 477 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CXXC5Q7LFL8 322 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC4A11Q8NBS3 891 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LRRN4CLQ8ND94 238 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF540Q8NDQ6 660 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 COMMD9Q9P000 198 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PTGFRNQ9P2B2 879 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 BTRCQ9Y297 605 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PLLPQ9Y342 182 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 E9PAM4 449 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 BPGMP07738 259 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 RHOQP17081 205 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 RPL4P36578 427 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 BNC1Q01954 994 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LPIN1Q14693 890 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PDK3Q15120 406 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 TAF5Q15542 800 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ERICH5Q6P6B1 374 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 PHYKPLQ8IUZ5 450 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 C4orf32Q8N8J7 132 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 C2orf15Q8WU43 125 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ADGRE2Q9UHX3 823 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF490Q9ULM2 529 aaPredicted RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FZD1Q9UP38 647 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 GSAPA4D1B5 854 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 UGT2B11O75310 529 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 DUSP11O75319 330 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 NDST3O95803 873 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 EOMESO95936 686 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 FGBP02675 491 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ARL2P36404 184 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 SLC25A3Q00325 362 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CRY2Q49AN0 593 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 GPR158Q5T848 1215 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 HECTD2Q5U5R9 776 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 HEATR4Q86WZ0 1026 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 CSPG4P5Q96PW8 444 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 TCF12Q99081 682 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 LGMNQ99538 433 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 AGO3Q9H9G7 860 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 ACP6Q9NPH0 428 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 NECTIN3Q9NQS3 549 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 DDX18Q9NVP1 670 aaKnown RBP6.48□□□□□ -1.37
LSAMP-207ENST00000539563 XPR1Q9UBH6 696 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 TRPS1Q9UHF7 1281 aa6.48□□□□□ -1.37
LSAMP-207ENST00000539563 MDM4O15151 490 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms