RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 DQX1Q8TE96 717 aaKnown RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 FBXL8Q96CD0 374 aa20.3■□□□□ 0.84
TMEM260-203ENST00000539559 GPATCH1Q9BRR8 931 aaKnown RBP20.3■□□□□ 0.84
TMEM260-203ENST00000539559 SNAP29O95721 258 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 MAGEA10P43363 369 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-203ENST00000539559 ITKQ08881 620 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 KIAA0930Q6ICG6 404 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-203ENST00000539559 KCTD8Q6ZWB6 473 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 ISCA2Q86U28 154 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 SCAMP5Q8TAC9 235 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 TSGA13Q96PP4 275 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 HIPK3Q9H422 1215 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 FADS3Q9Y5Q0 445 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 RRN3P2A6NIE6 340 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 HHLA1C9JL84 531 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 GABRDO14764 452 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 ANGPT2O15123 496 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 ACOX3O15254 700 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 IMPDH1P20839 514 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 IL10P22301 178 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 SLC6A2P23975 617 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 CCNCP24863 283 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 PSMA4P25789 261 aaKnown RBP20.29■□□□□ 0.84
TMEM260-203ENST00000539559 IRF5Q13568 498 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 ZIK1Q3SY52 487 aaPredicted RBP20.29■□□□□ 0.84
TMEM260-203ENST00000539559 RANBP10Q6VN20 620 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 MFSD2AQ8NA29 543 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 UBXN10Q96LJ8 280 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 SEPHS2Q99611 448 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 IL12RB2Q99665 862 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 SLC38A7Q9NVC3 462 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 VWA7Q9Y334 891 aa20.29■□□□□ 0.84
TMEM260-203ENST00000539559 TTC3P53804 2025 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 AP3B1O00203 1094 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 PSMD3O43242 534 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 KCNE1P15382 129 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 POLR2IP36954 125 aaKnown RBP20.28■□□□□ 0.84
TMEM260-203ENST00000539559 GEMP55040 296 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 DIO3P55073 304 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 SNX17Q15036 470 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 C3orf58Q8NDZ4 430 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TMEM74Q96NL1 305 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 KLHL5Q96PQ7 755 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TBC1D13Q9NVG8 400 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 UBXN8O00124 270 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 XPOTO43592 962 aaKnown RBP20.28■□□□□ 0.84
TMEM260-203ENST00000539559 KPNA6O60684 536 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 CDK14O94921 469 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 RBP1P09455 135 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 DNAJB1P25685 340 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 CCT8P50990 548 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 SCIMPQ6UWF3 145 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 PTGR2Q8N8N7 351 aaPredicted RBP20.28■□□□□ 0.84
TMEM260-203ENST00000539559 OR13J1Q8NGT2 312 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TUBGCP3Q96CW5 907 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 PGAP3Q96FM1 320 aaPredicted RBP20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TEX37Q96LM6 180 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TUBB1Q9H4B7 451 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 ARMC7Q9H6L4 198 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 SLAMF8Q9P0V8 285 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 ZNF236Q9UL36 1845 aa20.28■□□□□ 0.84
TMEM260-203ENST00000539559 TRIP12Q14669 1992 aaPredicted RBP20.27■□□□□ 0.84
TMEM260-203ENST00000539559 SMIM10L2AP0DMW4 78 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 SMIM10L2BP0DMW5 78 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 ZNF182P17025 639 aaPredicted RBP20.27■□□□□ 0.84
TMEM260-203ENST00000539559 POLD2P49005 469 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 CBX3Q13185 183 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 IHHQ14623 411 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 INPP5AQ14642 412 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 ACAP2Q15057 778 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 ATP6AP1Q15904 470 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 PFKFB4Q16877 469 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 PYCR3Q53H96 274 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 INTS11Q5TA45 600 aaKnown RBP20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TWF2Q6IBS0 349 aaKnown RBP20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TBPL2Q6SJ96 375 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 NAT16Q8N8M0 369 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TBC1D15Q8TC07 691 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TRPC4APQ8TEL6 797 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TWIST2Q8WVJ9 160 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 TANKQ92844 425 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 GFM2Q969S9 779 aaKnown RBP20.27■□□□□ 0.84
TMEM260-203ENST00000539559 CCDC126Q96EE4 140 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 ENTPD7Q9NQZ7 604 aa20.27■□□□□ 0.84
TMEM260-203ENST00000539559 MATN3O15232 486 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 GJB3O75712 270 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 HGFP14210 728 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 UGT1A1P22309 533 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 UGT1A4P22310 534 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 UGT1A3P35503 534 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 UGT1A5P35504 534 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 CLCNKBP51801 687 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 ATP1A4Q13733 1029 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 RAB41Q5JT25 222 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 OTUD3Q5T2D3 398 aaPredicted RBP20.27■□□□□ 0.83
TMEM260-203ENST00000539559 ROPN1LQ96C74 230 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 TIMM22Q9Y584 194 aa20.27■□□□□ 0.83
TMEM260-203ENST00000539559 PAGE1O75459 146 aa20.26■□□□□ 0.83
TMEM260-203ENST00000539559 BAIAP3O94812 1187 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms