RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 PKP2Q99959 881 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MFSD1Q9H3U5 465 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RC3H2Q9HBD1 1191 aaKnown RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 CYP4F12Q9HCS2 524 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 ADA2Q9NZK5 511 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 KIAA1671Q9BY89 1806 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 DOCK4Q8N1I0 1966 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 C8BP07358 591 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 SNRPB2P08579 225 aaKnown RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 ATP4BP51164 291 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 PIK3R6Q5UE93 754 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MARC1Q5VT66 337 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 HACD2Q6Y1H2 254 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 SPATA24Q86W54 205 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RNF135Q8IUD6 432 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 AHI1Q8N157 1196 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 TMEM102Q8N9M5 508 aaPredicted RBP14.56□□□□□ -0.08
CDCA3-207ENST00000538862 HMGCLL1Q8TB92 370 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 HASPINQ8TF76 798 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 L3HYPDHQ96EM0 354 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 TRPC7Q9HCX4 862 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 NT5MQ9NPB1 228 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 RGS18Q9NS28 235 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 TMEM248Q9NWD8 314 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 CACNA2D2Q9NY47 1150 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 TRAF6Q9Y4K3 522 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 VCANP13611 3396 aa14.56□□□□□ -0.08
CDCA3-207ENST00000538862 MYO16Q9Y6X6 1858 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 TRIM24O15164 1050 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 SMIM18P0DKX4 95 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 CD86P42081 329 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 RPL5P46777 297 aaKnown RBP14.55□□□□□ -0.08
CDCA3-207ENST00000538862 ERVK-21P61565 698 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 YWHAHQ04917 246 aaPredicted RBP14.55□□□□□ -0.08
CDCA3-207ENST00000538862 PDAP1Q13442 181 aaKnown RBP14.55□□□□□ -0.08
CDCA3-207ENST00000538862 NOMO2Q5JPE7 1267 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 NPAS4Q8IUM7 802 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF683Q8IZ20 524 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 TEX26Q8N6G2 289 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 KLHL23Q8NBE8 558 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 NAT14Q8WUY8 206 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 DUS3LQ96G46 650 aaKnown RBP14.55□□□□□ -0.08
CDCA3-207ENST00000538862 SLC25A23Q9BV35 468 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 ZYG11BQ9C0D3 744 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 GSTO2Q9H4Y5 243 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF696Q9H7X3 374 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 UBAP1Q9NZ09 502 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 LRFN2Q9ULH4 789 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 PCDHB8Q9UN66 801 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 SCML2Q9UQR0 700 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 XIRP2A4UGR9 3374 aa14.55□□□□□ -0.08
CDCA3-207ENST00000538862 FBP2O00757 339 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 TNFAIP8O95379 198 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 S1PR4O95977 384 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 MMP2P08253 660 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 HOXB8P17481 243 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ACADVLP49748 655 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 NFKB2Q00653 900 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 RHDQ02161 417 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 BTG3Q14201 252 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 AGKQ53H12 422 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 REP15Q6BDI9 236 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 FAM45BPQ6NSW5 357 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 LARP4Q71RC2 724 aaKnown RBP eCLIP14.54□□□□□ -0.083e-7■□□□□ 10.9
CDCA3-207ENST00000538862 SLC24A5Q71RS6 500 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PTAR1Q7Z6K3 402 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 FIBCD1Q8N539 461 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 FAM45AQ8TCE6 357 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ANKRD49Q8WVL7 239 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PEX13Q92968 403 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 TADA1Q96BN2 335 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF689Q96CS4 500 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 HMCESQ96FZ2 354 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ZFRQ96KR1 1074 aaKnown RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ASB2Q96Q27 587 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 TNFRSF12AQ9NP84 129 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 SPAG4Q9NPE6 437 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 NUDT5Q9UKK9 219 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 FIS1Q9Y3D6 152 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 E7ENX8 843 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 RNASEH2AO75792 299 aaKnown RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 TBX4P57082 545 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 CREB5Q02930 508 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ITKQ08881 620 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 SLC10A7Q0GE19 358 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 LAMB3Q13751 1172 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 USP41Q3LFD5 358 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ZNF678Q5SXM1 525 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 ISCA2Q86U28 154 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 SCN4BQ8IWT1 228 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PCDH20Q8N6Y1 951 aaKnown RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 DGCR14Q96DF8 476 aaKnown RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PHF21BQ96EK2 531 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 PRICKLE1Q96MT3 831 aaPredicted RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 MRPS26Q9BYN8 205 aaKnown RBP14.54□□□□□ -0.08
CDCA3-207ENST00000538862 FBXO44Q9H4M3 255 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 SP110Q9HB58 689 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 HCSTQ9UBK5 93 aa14.54□□□□□ -0.08
CDCA3-207ENST00000538862 CD300AQ9UGN4 299 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms