RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 GRID2O43424 1007 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 NRP2O60462 931 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 AOC2O75106 756 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RFPL2O75678 378 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 DDHD2O94830 711 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 GABARAPO95166 117 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 TOP3BO95985 862 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 NPPAP01160 153 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 JUNP05412 331 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 KRT8P05787 483 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 POLBP06746 335 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 APRTP07741 180 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 SNRPB2P08579 225 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 ENO2P09104 434 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 TCN1P20061 433 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 CD247P20963 164 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 KLRK1P26718 216 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 OPRL1P41146 370 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 ASPAP45381 313 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RPS9P46781 194 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 NPTX2P47972 431 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MRPL19P49406 292 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 ZNF143P52747 638 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 LIMK2P53671 638 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 PKNOX1P55347 436 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 TPTEP56180 551 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 SNX16P57768 344 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 ADAM17P78536 824 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 IFITM2Q01629 132 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MVKQ03426 396 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 FCHO2Q0JRZ9 810 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 GRIK2Q13002 908 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 GRAPQ13588 217 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 BMPR2Q13873 1038 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 HIST2H2ACQ16777 129 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 CYBRD1Q53TN4 286 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 FAM209AQ5JX71 171 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 XRRA1Q6P2D8 792 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 ZDHHC13Q8IUH4 622 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 KIAA2013Q8IYS2 634 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 CLYBLQ8N0X4 340 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MFSD4AQ8N468 514 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 CBR4Q8N4T8 237 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 PLD5Q8N7P1 536 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 SHCBP1Q8NEM2 672 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 OR6Q1Q8NGQ2 317 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RHOXF1Q8NHV9 184 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 GRAPLQ8TC17 118 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 SUN5Q8TC36 379 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 SLC2A14Q8TDB8 520 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MUL1Q969V5 352 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 ZNF566Q969W8 418 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 FKBP10Q96AY3 582 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 FBXL8Q96CD0 374 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MCRS1Q96EZ8 462 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MMP19Q99542 508 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RBBP8Q99708 897 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 ACO2Q99798 780 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 C17orf80Q9BSJ5 609 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 TRMOQ9BU70 441 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 BDH2Q9BUT1 245 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 GATA5Q9BWX5 397 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MMP27Q9H306 513 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MARCH7Q9H992 704 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 NMRAL1Q9HBL8 299 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 EML4Q9HC35 981 aaKnown RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 KLHL11Q9NVR0 708 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 SYBUQ9NX95 663 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 CACNA2D2Q9NY47 1150 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 RBAKQ9NYW8 714 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 IL20Q9NYY1 176 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 STMN3Q9NZ72 180 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 PI4KBQ9UBF8 816 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 MTRRQ9UBK8 725 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 TRPC5Q9UL62 973 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 USP18Q9UMW8 372 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 PRELID1Q9Y255 219 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 HEMK1Q9Y5R4 338 aaPredicted RBP6.71□□□□□ -1.34
USP28-207ENST00000538475 SNX5Q9Y5X3 404 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 OTOFQ9HC10 1997 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 CNTNAP4Q9C0A0 1308 aa6.71□□□□□ -1.34
USP28-207ENST00000538475 A0A1B0GTW7 788 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 TEX51A0A1B0GUA7 166 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 GOLGA8IPA6NC78 632 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 GOLGA8JA6NMD2 632 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 B8ZZF3 427 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 E7ENX8 843 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 M0R3G1 203 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 PLOD2O00469 737 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 MDM4O15151 490 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 KCNN4O15554 427 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 NDUFS2O75306 463 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 BCAS1O75363 584 aaPredicted RBP6.7□□□□□ -1.34
USP28-207ENST00000538475 TULP3O75386 442 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 UPK1BO75841 260 aa6.7□□□□□ -1.34
USP28-207ENST00000538475 ZMPSTE24O75844 475 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms