RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 HNRNPA1L2Q32P51 320 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 PKDCCQ504Y2 493 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ANGPTL8Q6UXH0 198 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 UNC5AQ6ZN44 842 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 GALNT13Q8IUC8 556 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 PSTKQ8IV42 348 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 CYP4X1Q8N118 509 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 NKD2Q969F2 451 aaPredicted RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 ARRDC3Q96B67 414 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 MTFMTQ96DP5 389 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 MRGPRX1Q96LB2 322 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FOPNLQ96NB1 174 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 COPS8Q99627 209 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FAM83CQ9BQN1 747 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 KLHL20Q9Y2M5 609 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 INTS1Q8N201 2190 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 SDR42E2A6NKP2 422 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 WNT9AO14904 365 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 LIASO43766 372 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FAM155BO75949 473 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ANXA6P08133 673 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 JUPP14923 745 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 SPINK2P20155 84 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 BCKDHBP21953 392 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 LPOP22079 712 aaPredicted RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 MAGEA4P43358 317 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 RPL21P46778 160 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 GYS2P54840 703 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 ARF5P84085 180 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 PTP4A2Q12974 167 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 TEAD4Q15561 434 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 LGSNQ5TDP6 509 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FYB2Q5VWT5 728 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 FSTL4Q6MZW2 842 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 NEPROQ6NW34 567 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 METTL27Q8N6F8 245 aaPredicted RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 PYCR2Q96C36 320 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 OTUB2Q96DC9 234 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 TRMT2BQ96GJ1 504 aaKnown RBP7.24□□□□□ -1.25
MSH6-209ENST00000538136 SEMA4AQ9H3S1 761 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 GAREM1Q9H706 876 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 IL21RQ9HBE5 538 aa7.24□□□□□ -1.25
MSH6-209ENST00000538136 GLYATL1P3A0A0U1RQE8 302 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 OR52A4PA6NMU1 304 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 SUPT3HB4E1H0 165 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TNFRSF10AO00220 468 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 SUPT3HO75486 399 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 HNF1BP35680 557 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 HALP42357 657 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 SIM1P81133 766 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 SIGLEC14Q08ET2 396 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 NIPAL4Q0D2K0 466 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 HNRNPDQ14103 355 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 FBXO43Q4G163 708 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TMEM215Q68D42 235 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 MRNIPQ6NTE8 343 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TTC27Q6P3X3 843 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 Q6ZSR6 202 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TBC1D1Q86TI0 1168 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 SETD3Q86TU7 594 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 MPP5Q8N3R9 675 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 RNF217Q8TC41 542 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 PATE1Q8WXA2 126 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 CCDC3Q9BQI4 270 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 ERP44Q9BS26 406 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TRPM6Q9BX84 2022 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 SLC17A9Q9BYT1 436 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TRMT6Q9UJA5 497 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 CCDC188H7C350 402 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 C6P13671 934 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 COL9A1P20849 921 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 HNRNPH3P31942 346 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 MAPKAPK2P49137 400 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 CDKN1CP49918 316 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 IL10RBQ08334 325 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 HYAL2Q12891 473 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 CCNG2Q16589 344 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 ASTE1Q2TB18 679 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 DCAF12L1Q5VU92 463 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 PPP4R4Q6NUP7 873 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 ZC3H14Q6PJT7 736 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 SCIMPQ6UWF3 145 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 PARS2Q7L3T8 475 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 CMC1Q7Z7K0 106 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 KBTBD6Q86V97 674 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 SH2D3CQ8N5H7 860 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 CNTD1Q8N815 330 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 ZNF557Q8N988 423 aaPredicted RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 FBF1Q8TES7 1133 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 WFIKKN2Q8TEU8 576 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 EDAQ92838 391 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 TTLL2Q9BWV7 592 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 STN1Q9H668 368 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 APOBEC3BQ9UH17 382 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 C4orf47A7E2U8 309 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 ANKRD66B4E2M5 251 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 KHNYNO15037 678 aaKnown RBP7.23□□□□□ -1.25
MSH6-209ENST00000538136 OPHN1O60890 802 aa7.23□□□□□ -1.25
MSH6-209ENST00000538136 NMBRP28336 390 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms