RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 FAM83CQ9BQN1 747 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RETREG1Q9H6L5 497 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SNX15Q9NRS6 342 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MARK1Q9P0L2 795 aa12.99□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF195O14628 629 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PSMD3O43242 534 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SMAD6O43541 496 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KRT36O76013 467 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMCC1O94876 653 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MMP2P08253 660 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RALBP11234 206 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CPOXP36551 454 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 HADHAP40939 763 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CSRP3P50461 194 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RENBPP51606 427 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ABCE1P61221 599 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IRX4P78413 519 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FCHO2Q0JRZ9 810 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CCDC6Q16204 474 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GEN1Q17RS7 908 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF783Q6ZMS7 281 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IPMKQ8NFU5 416 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PPP4R1Q8TF05 950 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SORCS1Q8WY21 1168 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NMRK1Q9NWW6 199 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 APOBEC2Q9Y235 224 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PMPCBO75439 489 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LYPLA1O75608 230 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CPA3P15088 417 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FOSL2P15408 326 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KCNA4P22459 653 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CD86P42081 329 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ALDH18A1P54886 795 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ACTR3P61158 418 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KDSRQ06136 332 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PCSK7Q16549 785 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PPM1JQ5JR12 505 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CWF19L1Q69YN2 538 aaKnown RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMEM154Q6P9G4 183 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ATG14Q6ZNE5 492 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FBXO27Q8NI29 283 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 STMN2Q93045 179 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FATE1Q969F0 183 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZNF669Q96BR6 464 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FAM136AQ96C01 138 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CHFRQ96EP1 664 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CINPQ9BW66 212 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TM6SF2Q9BZW4 377 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GPAMQ9HCL2 828 aa12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 KIAA1522Q9P206 1035 aaPredicted RBP12.98□□□□□ -0.33
CDK5RAP3-202ENST00000536708 F5P12259 2224 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ANTXRLA6NF34 631 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MAP3K13O43283 966 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TIMM44O43615 452 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 H2AFYO75367 372 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ADH1CP00326 375 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CHRNA4P43681 627 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CPA2P48052 419 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC6A11P48066 632 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 IDH3AP50213 366 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CYTH1Q15438 398 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ATXN7L2Q5T6C5 722 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 FSTL4Q6MZW2 842 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SLC30A9Q6PML9 568 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MAVSQ7Z434 540 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MYLK4Q86YV6 388 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 CCDC117Q8IWD4 279 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 MFSD6LQ8IWD5 586 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ULK2Q8IYT8 1036 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 DEFB123Q8N688 67 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 OR6K2Q8NGY2 324 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ARRDC2Q8TBH0 407 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NRG4Q8WWG1 115 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SEMA3CQ99985 751 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 C2orf49Q9BVC5 232 aaPredicted RBP12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NSMCE4AQ9NXX6 385 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 OBP2AQ9NY56 170 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 LHX3Q9UBR4 397 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 SOX13Q9UN79 622 aa12.97□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TMEM114B3SHH9 223 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 C2CD4DB7Z1M9 353 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 HOXC11O43248 304 aaPredicted RBP12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 TULP3O75386 442 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 NFATC1O95644 943 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PSMC3P17980 439 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 PRDX6P30041 224 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 GDI1P31150 447 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ARRB2P32121 409 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 HTR4Q13639 388 aa12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 THOC5Q13769 683 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 RBBP5Q15291 538 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 ZRSR2Q15696 482 aaKnown RBP12.96□□□□□ -0.33
CDK5RAP3-202ENST00000536708 THEMIS2Q5TEJ8 643 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms