RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 ZNF765Q7L2R6 523 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 TECPR1Q7Z6L1 1165 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 HEATR4Q86WZ0 1026 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 CCNJLQ8IV13 435 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 OR8K1Q8NGG5 319 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
MRPS35-202ENST00000536569 WBP1Q96G27 269 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 BBC3Q96PG8 261 aaPredicted RBP13.17□□□□□ -0.3
MRPS35-202ENST00000536569 DNAJC7Q99615 494 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 SEMA3CQ99985 751 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 GSDMCQ9BYG8 508 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 FRMD8Q9BZ67 464 aaPredicted RBP13.17□□□□□ -0.3
MRPS35-202ENST00000536569 TMEM168Q9H0V1 697 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 NT5MQ9NPB1 228 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 MRPL40Q9NQ50 206 aaKnown RBP13.17□□□□□ -0.3
MRPS35-202ENST00000536569 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 RPL26L1Q9UNX3 145 aaKnown RBP13.17□□□□□ -0.3
MRPS35-202ENST00000536569 PCDHGA7Q9Y5G6 932 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 PTPRQQ9UMZ3 2332 aa13.17□□□□□ -0.3
MRPS35-202ENST00000536569 BPTFQ12830 3046 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 A0A1W2PQM1 296 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 NPIPB15A6NHN6 443 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 PLD2O14939 933 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 MFSD11O43934 449 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 RPLP0P05388 317 aaKnown RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 CEACAM5P06731 702 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 IVLP07476 585 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 CD48P09326 243 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 TMEM253P0C7T8 217 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ETV3P41162 512 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 INHBCP55103 352 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 CCL7P80098 99 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 RHDQ02161 417 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ITKQ08881 620 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ASTE1Q2TB18 679 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 KCTD16Q68DU8 428 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 SPECC1LQ69YQ0 1117 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ADAMTSL4Q6UY14 1074 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 HSD11B1LQ7Z5J1 315 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 C17orf82Q86X59 251 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 NRSN1Q8IZ57 195 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 PELI3Q8N2H9 469 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 XPO4Q9C0E2 1151 aaKnown RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 DPEP2Q9H4A9 486 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 CARS2Q9HA77 564 aaKnown RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
MRPS35-202ENST00000536569 LRIT1Q9P2V4 623 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 ACSL6Q9UKU0 697 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 SLC17A4Q9Y2C5 497 aa13.16□□□□□ -0.3
MRPS35-202ENST00000536569 A0A0J9YYE9 177 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 CAPN8A6NHC0 703 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 KLK10O43240 276 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 TNFSF15O95150 251 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 TRBC1P01850 177 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 TPM1P09493 284 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 ARHGAP25P42331 645 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 EPHB1P54762 984 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 CXADRP78310 365 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 ZFP36L1Q07352 338 aaKnown RBP13.15□□□□□ -0.3
MRPS35-202ENST00000536569 NR1D2Q14995 579 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 RAET1GQ6H3X3 334 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 NYAP1Q6ZVC0 841 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 Q6ZVL8 140 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 RAB11FIP2Q7L804 512 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 ZNF438Q7Z4V0 828 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 SPRED1Q7Z699 444 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 FBXO39Q8N4B4 442 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 HDAC11Q96DB2 347 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 LYSMD1Q96S90 227 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 DEF6Q9H4E7 631 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 SYNDIG1Q9H7V2 258 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 RBM22Q9NW64 420 aaKnown RBP eCLIP13.15□□□□□ -0.3
MRPS35-202ENST00000536569 MOSPD1Q9UJG1 213 aa13.15□□□□□ -0.3
MRPS35-202ENST00000536569 B4DGG1 531 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 PDHA1P08559 390 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 GPR3P46089 330 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 GPR1P46091 355 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 PTSQ03393 145 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 LRP8Q14114 963 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 TCEA2Q15560 299 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 ATP13A4Q4VNC1 1196 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 LRRC66Q68CR7 880 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 DENND2CQ68D51 928 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 TSPAN33Q86UF1 283 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 NRROSQ86YC3 692 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 CCL4L1Q8NHW4 92 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 ARRDC2Q8TBH0 407 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 SLC39A7Q92504 469 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 AP2M1Q96CW1 435 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 NAF1Q96HR8 494 aaKnown RBP13.14□□□□□ -0.31
MRPS35-202ENST00000536569 ZNF830Q96NB3 372 aaPredicted RBP13.14□□□□□ -0.31
MRPS35-202ENST00000536569 ANP32EQ9BTT0 268 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 TDRD1Q9BXT4 1180 aaKnown RBP13.14□□□□□ -0.31
MRPS35-202ENST00000536569 CDH19Q9H159 772 aa13.14□□□□□ -0.31
MRPS35-202ENST00000536569 EPB41L5Q9HCM4 733 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms