RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DRG1Q9Y295 367 aaKnown RBP17.86■□□□□ 0.45
DDX55-204ENST00000536079 BTBD3Q9Y2F9 522 aa17.86■□□□□ 0.45
DDX55-204ENST00000536079 ZNF711Q9Y462 761 aa17.86■□□□□ 0.45
DDX55-204ENST00000536079 SH3BP5O60239 455 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 SDC3O75056 442 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 ANXA9O76027 345 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 SLC4A1P02730 911 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 ZNF30P17039 623 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 STIP1P31948 543 aaKnown RBP17.85■□□□□ 0.45
DDX55-204ENST00000536079 RPL22P35268 128 aaKnown RBP17.85■□□□□ 0.45
DDX55-204ENST00000536079 TRIM23P36406 574 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 RXRGP48443 463 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 P3H1Q32P28 736 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 DBX2Q6ZNG2 339 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 PIP4P1Q86T03 277 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 ASCC3Q8N3C0 2202 aaKnown RBP17.85■□□□□ 0.45
DDX55-204ENST00000536079 TTC30BQ8N4P2 665 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 PTCD2Q8WV60 388 aaKnown RBP17.85■□□□□ 0.45
DDX55-204ENST00000536079 ETNK1Q9HBU6 452 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 UCKL1Q9NWZ5 548 aa17.85■□□□□ 0.45
DDX55-204ENST00000536079 TP53BP1Q12888 1972 aaPredicted RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 GIPC1O14908 333 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 BUD23O43709 281 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 MAGEC1O60732 1142 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 ZNF883P0CG24 379 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 NFKBIAP25963 317 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 SPINT3P49223 89 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 CCT8P50990 548 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 MTM1Q13496 603 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 PRPSAP1Q14558 356 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 PTPRCAPQ14761 206 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 PAPD7Q5XG87 772 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 MICALCLQ6ZW33 695 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 RBFAQ8N0V3 343 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 PDCD7Q8N8D1 485 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 GPR26Q8NDV2 337 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 DEFB124Q8NES8 71 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 FAM174AQ8TBP5 190 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 ACTRT1Q8TDG2 376 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 SAP25Q8TEE9 199 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 RTKNQ9BST9 563 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 RIOK2Q9BVS4 552 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 ZFYVE1Q9HBF4 777 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 PIH1D1Q9NWS0 290 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 ZKSCAN5Q9Y2L8 839 aa17.84■□□□□ 0.45
DDX55-204ENST00000536079 AAR2Q9Y312 384 aaKnown RBP17.84■□□□□ 0.45
DDX55-204ENST00000536079 TMEM202A6NGA9 273 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 SCAMP1O15126 338 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 HLA-DPA1P20036 260 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 MSNP26038 577 aaKnown RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 EPHA8P29322 1005 aaPredicted RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 ID4P47928 161 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 YPEL5P62699 121 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 DPTQ07507 201 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 NFATC4Q14934 902 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 DCP2Q8IU60 420 aaKnown RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 SLC25A45Q8N413 288 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 MAIP1Q8WWC4 291 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 TSACCQ96A04 125 aaPredicted RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 AP2M1Q96CW1 435 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 NAPGQ99747 312 aaPredicted RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 TBL1YQ9BQ87 522 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 FSD1LQ9BXM9 530 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 DNAJC28Q9NX36 388 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 CNOT6Q9ULM6 557 aaKnown RBP17.83■□□□□ 0.44
DDX55-204ENST00000536079 KCTD3Q9Y597 815 aa17.83■□□□□ 0.44
DDX55-204ENST00000536079 GOLGA6CA6NDK9 693 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 GOLGA6BA6NDN3 693 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 FADS2P1A8MWK0 482 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 PGRMC1O00264 195 aaKnown RBP17.82■□□□□ 0.44
DDX55-204ENST00000536079 PCDHGA12O60330 932 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 CBFA2T3O75081 653 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 ZNF189O75820 626 aaPredicted RBP17.82■□□□□ 0.44
DDX55-204ENST00000536079 FUCA1P04066 466 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 FGF1P05230 155 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 GOLGA6DP0CG33 693 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 BPIP17213 487 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 TPH1P17752 444 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 CA5AP35218 305 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 GRIA1P42261 906 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 SLC14A1Q13336 389 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 CYP1B1Q16678 543 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 ALG11Q2TAA5 492 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 ALS2CLQ60I27 953 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 RAET1GQ6H3X3 334 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 CCDC70Q6NSX1 233 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 ENPP7Q6UWV6 458 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 MACC1Q6ZN28 852 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 TRIM74Q86UV6 250 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 PARGQ86W56 976 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 HEATR4Q86WZ0 1026 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 NAXDQ8IW45 347 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 BLOC1S5Q8TDH9 187 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 OR1E3Q8WZA6 343 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 MAGOHBQ96A72 148 aaKnown RBP17.82■□□□□ 0.44
DDX55-204ENST00000536079 CAPZA3Q96KX2 299 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 TEX101Q9BY14 249 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 GPR63Q9BZJ6 419 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms