RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 OR6B1O95007 311 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 SLC4A1P02730 911 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 ALDOCP09972 364 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 MTHFD2P13995 350 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 PSMC3P17980 439 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 OGNP20774 298 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 MAPKAPK2P49137 400 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 GK3PQ14409 553 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 C6orf10Q5SRN2 563 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 LAYNQ6UX15 382 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 PTGR2Q8N8N7 351 aaPredicted RBP16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 OR4L1Q8NH43 312 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 BLOC1S5Q8TDH9 187 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 DNAJC1Q96KC8 554 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 PRPF18Q99633 342 aaKnown RBP16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 SEMA6AQ9H2E6 1030 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 SNX13Q9Y5W8 968 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 ARL5AQ9Y689 179 aa16.02■□□□□ 0.15
CHMP1A-202ENST00000535997 CCDC162PA2VCL2 907 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 C7orf72A4D263 438 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MOXD2PA6NHM9 499 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 VILLO15195 856 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 PRAMEF11O60813 436 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ETS2P15036 469 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 TXNL4AP83876 142 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MAP7Q14244 749 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 KCNA10Q16322 511 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 NRF1Q16656 503 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MAP7D1Q3KQU3 841 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 IFNL1Q8IU54 200 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ZUFSPQ96AP4 578 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 GPATCH1Q9BRR8 931 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 SYTL2Q9HCH5 934 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MID1IP1Q9NPA3 183 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ARMC1Q9NVT9 282 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 A0A0J9YYE9 177 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MT-CO1P00395 513 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 IGLV3-27P01718 113 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 SLC7A2P52569 658 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 NR1H2P55055 460 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 RING1Q06587 406 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MTA1Q13330 715 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 PFKFB4Q16877 469 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 KIF19Q2TAC6 998 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 EML3Q32P44 896 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 PRMT9Q6P2P2 845 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 CYP2R1Q6VVX0 501 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 COLGALT2Q8IYK4 626 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 ATOH8Q96SQ7 321 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 TLR8Q9NR97 1041 aaKnown RBP16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 CATSPERZQ9NTU4 200 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 MAP10Q9P2G4 905 aa16.01■□□□□ 0.15
CHMP1A-202ENST00000535997 SYN3O14994 580 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 CSPG5O95196 566 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 SERPINF2P08697 491 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 CTGFP29279 349 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 ACVRL1P37023 503 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 OR1G1P47890 313 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 STC1P52823 247 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 APOFQ13790 326 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 ZNF235Q14590 738 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 OR4D1Q15615 310 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 GEN1Q17RS7 908 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 NADK2Q4G0N4 442 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 C10orf120Q5SQS8 335 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 KANK2Q63ZY3 851 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 RBM44Q6ZP01 1051 aaKnown RBP16■□□□□ 0.15
CHMP1A-202ENST00000535997 SLC24A5Q71RS6 500 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 RETREG3Q86VR2 466 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 RASAL3Q86YV0 1011 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 CHERPQ8IWX8 916 aaKnown RBP16■□□□□ 0.15
CHMP1A-202ENST00000535997 MIER2Q8N344 545 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 METTL25Q8N6Q8 603 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 SNX31Q8N9S9 440 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 STAG3L4Q8TBR4 150 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 TWIST2Q8WVJ9 160 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 FBXO32Q969P5 355 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 ZNF599Q96NL3 588 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 CYP2S1Q96SQ9 504 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 AARSD1Q9BTE6 412 aaKnown RBP16■□□□□ 0.15
CHMP1A-202ENST00000535997 INTS10Q9NVR2 710 aaKnown RBP16■□□□□ 0.15
CHMP1A-202ENST00000535997 ABCD2Q9UBJ2 740 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 NOD1Q9Y239 953 aa16■□□□□ 0.15
CHMP1A-202ENST00000535997 UBXN8O00124 270 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 PPP6CO00743 305 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 MUSKO15146 869 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 SIX3O95343 332 aaPredicted RBP15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 MATN4O95460 622 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 BMP2P12643 396 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 ATP6V1B1P15313 513 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 INHBEP58166 350 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 SEMA3AQ14563 771 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 PTPRCAPQ14761 206 aa15.99■□□□□ 0.15
CHMP1A-202ENST00000535997 TYSND1Q2T9J0 566 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms