RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 TDRPQ86YL5 185 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 ENAHQ8N8S7 591 aaPredicted RBP4.84□□□□□ -1.63
CCDC7-207ENST00000535327 LSM14AQ8ND56 463 aaKnown RBP4.84□□□□□ -1.63
CCDC7-207ENST00000535327 ZNF248Q8NDW4 579 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 HMGCLL1Q8TB92 370 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 PPM1EQ8WY54 764 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 SLC39A13Q96H72 371 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 ZNF599Q96NL3 588 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 PSMD1Q99460 953 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 RASSF1Q9NS23 344 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 IL1RAPL1Q9NZN1 696 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 KIAA1456Q9P272 454 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
CCDC7-207ENST00000535327 LDHAP00338 332 aaKnown RBP4.83□□□□□ -1.64
CCDC7-207ENST00000535327 CNPP09543 421 aaKnown RBP4.83□□□□□ -1.64
CCDC7-207ENST00000535327 KRT5P13647 590 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 PAX1P15863 534 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 SHMT1P34896 483 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 VEPH1Q14D04 833 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 NOTCH2NLQ7Z3S9 236 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 ADGRG6Q86SQ4 1221 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 ADAD2Q8NCV1 583 aaKnown RBP4.83□□□□□ -1.64
CCDC7-207ENST00000535327 BEST2Q8NFU1 509 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 ZNF354BQ96LW1 612 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 BBS4Q96RK4 519 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 MTERF1Q99551 399 aaKnown RBP4.83□□□□□ -1.64
CCDC7-207ENST00000535327 SYT17Q9BSW7 474 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 NOD2Q9HC29 1040 aa4.83□□□□□ -1.64
CCDC7-207ENST00000535327 FBXO9Q9UK97 447 aaPredicted RBP4.83□□□□□ -1.64
CCDC7-207ENST00000535327 TMEM202A6NGA9 273 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 BAG4O95429 457 aaKnown RBP4.82□□□□□ -1.64
CCDC7-207ENST00000535327 RNF224P0DH78 156 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 MAOAP21397 527 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 BDKRB2P30411 391 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 DCTP40126 519 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 PDE1BQ01064 536 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 GTF2H2Q13888 395 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 TAF11Q15544 211 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 LPAL2Q16609 132 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 SLC35E4Q6ICL7 350 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 TRNP1Q6NT89 227 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 GTF2H2CQ6P1K8 395 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 TADA2BQ86TJ2 420 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 ZCCHC9Q8N567 271 aaKnown RBP4.82□□□□□ -1.64
CCDC7-207ENST00000535327 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 CNBD1Q8NA66 436 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 ELP4Q96EB1 424 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 C17orf77Q96MU5 243 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 TKTL2Q9H0I9 626 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
CCDC7-207ENST00000535327 HEXAP06865 529 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 ADCK5Q3MIX3 580 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 LINGO2Q7L985 606 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 SPATA6LQ8N4H0 392 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 CADM4Q8NFZ8 388 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 ST6GAL2Q96JF0 529 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 LBHD1Q9BQE6 289 aaPredicted RBP4.81□□□□□ -1.64
CCDC7-207ENST00000535327 DLGAP4Q9Y2H0 992 aa4.81□□□□□ -1.64
CCDC7-207ENST00000535327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.81□□□□□ -1.64
CCDC7-207ENST00000535327 WDR1O75083 606 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 TACC1O75410 805 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 METAP2P50579 478 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC7-207ENST00000535327 GNB1P62873 340 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 TBL3Q12788 808 aaKnown RBP4.8□□□□□ -1.64
CCDC7-207ENST00000535327 ANKRD1Q15327 319 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 ZNF280DQ6N043 979 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 FAM171BQ6P995 826 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
CCDC7-207ENST00000535327 C15orf39Q6ZRI6 1047 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 BPIFA1Q9NP55 256 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 FAM118AQ9NWS6 357 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 LOXL2Q9Y4K0 774 aa4.8□□□□□ -1.64
CCDC7-207ENST00000535327 URODP06132 367 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 GALTP07902 379 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 HOXC13P31276 330 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 EFNB1P98172 346 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 SLC1A5Q15758 541 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 PDCD2Q16342 344 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-207ENST00000535327 TCTN1Q2MV58 587 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 C10orf62Q5T681 223 aaPredicted RBP4.79□□□□□ -1.64
CCDC7-207ENST00000535327 ANKRD45Q5TZF3 282 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 ATF7IPQ6VMQ6 1270 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 HUS1BQ8NHY5 278 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 RHBDF1Q96CC6 855 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 REEP2Q9BRK0 252 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 ITM2CQ9NQX7 267 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 FAM96BQ9Y3D0 163 aa4.79□□□□□ -1.64
CCDC7-207ENST00000535327 ARID4BQ4LE39 1312 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-207ENST00000535327 CTAGE9A4FU28 777 aa4.78□□□□□ -1.64
CCDC7-207ENST00000535327 KRTAP16-1A8MUX0 517 aa4.78□□□□□ -1.64
CCDC7-207ENST00000535327 BLOC1S5-TXNDC5H3BN57 136 aa4.78□□□□□ -1.64
CCDC7-207ENST00000535327 MT-CYBP00156 380 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-207ENST00000535327 CTAGE8P0CG41 777 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms