RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TSEN34Q9BSV6 310 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 KLC2Q9H0B6 622 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 EPB41L1Q9H4G0 881 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ATP13A3Q9H7F0 1226 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 HMG20AQ9NP66 347 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ABI2Q9NYB9 513 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.05□□□□□ -0.961e-8■□□□□ 10.5
SF3B2-216ENST00000534765 KLHL3Q9UH77 587 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CORINQ9Y5Q5 1042 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CFAP54Q96N23 3096 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PRPSAP2O60256 369 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 FAM155BO75949 473 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 KRT20P35900 424 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 HADHAP40939 763 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 HSPA13P48723 471 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 SERPINH1P50454 418 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 RPL10AP62906 217 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 XIAPP98170 497 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 FSCBQ5H9T9 825 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 VWA5B1Q5TIE3 1220 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CASC4Q6P4E1 433 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 DRICH1Q6PGQ1 229 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ITIH5Q86UX2 942 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 MARVELD2Q8N4S9 558 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 DNAJC5GQ8N7S2 189 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 TNIP2Q8NFZ5 429 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 DPF3Q92784 378 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 RAD21L1Q9H4I0 556 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CDH9Q9ULB4 789 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 RAB26Q9ULW5 256 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 UGT2A1Q9Y4X1 527 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 OBSL1O75147 1896 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 A0A088AWK7 358 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 TBKBP1A7MCY6 615 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PDZK1P1A8MUH7 402 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ACRP10323 421 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CES1P23141 567 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 RACK1P63244 317 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PLCL1Q15111 1095 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PDPK2PQ6A1A2 396 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 LRRC8EQ6NSJ5 796 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ZCCHC8Q6NZY4 707 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 C16orf59Q7L2K0 433 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 GALNT7Q86SF2 657 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CAND1Q86VP6 1230 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 TOR1AIP2Q8NFQ8 470 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 RSAD2Q8WXG1 361 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PGBD4Q96DM1 585 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 VMP1Q96GC9 406 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF486Q96H40 463 aaPredicted RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CCDC120Q96HB5 630 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 TNIP3Q96KP6 325 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 HSFY1Q96LI6 401 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 PKP2Q99959 881 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ACBD6Q9BR61 282 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 REXO4Q9GZR2 422 aaKnown RBP9.05□□□□□ -0.96
SF3B2-216ENST00000534765 COQ10BQ9H8M1 238 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 ZNF304Q9HCX3 659 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 GMIPQ9P107 970 aa9.05□□□□□ -0.96
SF3B2-216ENST00000534765 CNTRLQ7Z7A1 2325 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 H0Y858 1186 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SCAMP3O14828 347 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 COL6A1P12109 1028 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 CKMT2P17540 419 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 RPL9P32969 192 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SLC9A3P48764 834 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PGGT1BP53609 377 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PLIN5Q00G26 463 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 DPYSQ14117 519 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 GRM2Q14416 872 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ATAD3BQ5T9A4 648 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PM20D1Q6GTS8 502 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SYTL1Q8IYJ3 562 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 KCTD4Q8WVF5 259 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TRIT1Q9H3H1 467 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 CWH43Q9H720 699 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SMYD2Q9NRG4 433 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ACTL7BQ9Y614 415 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ACTL7AQ9Y615 435 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 A0A1W2PQH9 124 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TTC24A2A3L6 582 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PHGDHO43175 533 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 TBC1D4O60343 1298 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 KLHL2O95198 593 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 IGLV3-25P01717 112 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ALDH2P05091 517 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 LINC00271P0C7V0 271 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 ATF6P18850 670 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 SAT1P21673 171 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 HOXD10P28358 340 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 PRKAA2P54646 552 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 POLD3Q15054 466 aaPredicted RBP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3B2-216ENST00000534765 FAM171A1Q5VUB5 890 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 KCNT2Q6UVM3 1135 aa9.04□□□□□ -0.96
SF3B2-216ENST00000534765 BNC2Q6ZN30 1099 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms