RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 OLFM3Q96PB7 478 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 PANX2Q96RD6 677 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 SLC25A51Q9H1U9 297 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 PCDH9Q9HC56 1237 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 NT5MQ9NPB1 228 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 HACD3Q9P035 362 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 ENTPD2Q9Y5L3 495 aa10.38□□□□□ -0.75
CSDE1-217ENST00000534699 HGSO14964 777 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-217ENST00000534699 GCATO75600 419 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 PTPN7P35236 360 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 EPHB1P54762 984 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 DEFB133Q30KQ1 61 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 GUSBP11Q6P575 273 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 OR1E3Q8WZA6 343 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 RBM41Q96IZ5 413 aaKnown RBP10.37□□□□□ -0.75
CSDE1-217ENST00000534699 GFM1Q96RP9 751 aaKnown RBP10.37□□□□□ -0.75
CSDE1-217ENST00000534699 CCDC3Q9BQI4 270 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 FEZ2Q9UHY8 353 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-217ENST00000534699 RAXQ9Y2V3 346 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 BRINP1O60477 761 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 ITGA2BP08514 1039 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 EPHA4P54764 986 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 INHBCP55103 352 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 TMPRSS3P57727 454 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 TAS2R40P59535 323 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 GABREP78334 506 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 CCDC70Q6NSX1 233 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 KATNAL2Q8IYT4 538 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 RBFAQ8N0V3 343 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 EXD1Q8NHP7 514 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 MRFAP1L1Q96HT8 127 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 HERPUD2Q9BSE4 406 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 MLPHQ9BV36 600 aaPredicted RBP10.37□□□□□ -0.75
CSDE1-217ENST00000534699 ABCG8Q9H221 673 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 DTLQ9NZJ0 730 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 TRHDEQ9UKU6 1024 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 PCDHGC4Q9Y5F7 938 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 CFAP54Q96N23 3096 aa10.37□□□□□ -0.75
CSDE1-217ENST00000534699 SCN8AQ9UQD0 1980 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CPED1A4D0V7 1026 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 C3orf70A6NLC5 250 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 NOBOXO60393 691 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 PPFIA2O75334 1257 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CEACAM5P06731 702 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CETN2P41208 172 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 GPR1P46091 355 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 GPLD1P80108 840 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 ZFP36L1Q07352 338 aaKnown RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 ZFYVE27Q5T4F4 411 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 TXNRD3NBQ6F5E7 133 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CRTC1Q6UUV9 634 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 TAF8Q7Z7C8 310 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 LRRC45Q96CN5 670 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 IMP4Q96G21 291 aaKnown RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 SLC46A1Q96NT5 459 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 OR2M4Q96R27 311 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CARD9Q9H257 536 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 STN1Q9H668 368 aaKnown RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 ASCL3Q9NQ33 180 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 COQ6Q9Y2Z9 468 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 DNMT3AQ9Y6K1 912 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 ACACBO00763 2458 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 D6RAR5 112 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 USP12O75317 370 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 PRKCGP05129 697 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 PYGMP11217 842 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 TCF4P15884 667 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 SPA17Q15506 151 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 HEATR4Q86WZ0 1026 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 TMTC1Q8IUR5 882 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 CCNJLQ8IV13 435 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 RBM12BQ8IXT5 1001 aaKnown RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 KYQ8NBH2 561 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 TSACCQ96A04 125 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 AP2M1Q96CW1 435 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 ZSCAN5AQ9BUG6 496 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.36□□□□□ -0.75
CSDE1-217ENST00000534699 FGF22Q9HCT0 170 aa10.36□□□□□ -0.75
CSDE1-217ENST00000534699 NPIPB15A6NHN6 443 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 ANKRD66B4E2M5 251 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 ATXN7O15265 892 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 NVLO15381 856 aaKnown RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 ITIH2P19823 946 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 FASLGP48023 281 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 B4GALNT1Q00973 533 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 MESDQ14696 234 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PRKD1Q15139 912 aaPredicted RBP10.35□□□□□ -0.75
CSDE1-217ENST00000534699 CDKN3Q16667 212 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 COL28A1Q2UY09 1125 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 CCDC157Q569K6 752 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 KDM7AQ6ZMT4 941 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 HSD11B1LQ7Z5J1 315 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 NT5DC3Q86UY8 548 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PLD5Q8N7P1 536 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 PLA2G15Q8NCC3 412 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 CCDC112Q8NEF3 446 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 BRSK1Q8TDC3 778 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 CCDC74AQ96AQ1 378 aa10.35□□□□□ -0.75
CSDE1-217ENST00000534699 VPS35Q96QK1 796 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms