RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	CCDC186	Q7Z3E2	898 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	TADA2B	Q86TJ2	420 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	GATAD2A	Q86YP4	633 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CRYBG2	Q8N1P7	616 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CPXM2	Q8N436	756 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	SLC2A14	Q8TDB8	520 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	SORCS1	Q8WY21	1168 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CNDP2	Q96KP4	475 aa	Known RBP	6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CPPED1	Q9BRF8	314 aa	Predicted RBP	6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	MED10	Q9BTT4	135 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	ACE2	Q9BYF1	805 aa	Predicted RBP	6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	SEMA4C	Q9C0C4	833 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CIPC	Q9C0C6	399 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	SDCBP2	Q9H190	292 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	SGK2	Q9HBY8	427 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	AGPAT3	Q9NRZ7	376 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	PANK4	Q9NVE7	773 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CLIC5	Q9NZA1	410 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	HMGXB4	Q9UGU5	601 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	FBXO2	Q9UK22	296 aa	Predicted RBP	6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CLEC4E	Q9ULY5	219 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	PLAA	Q9Y263	795 aa		6.28	□□□□□ -1.4
PICALM-223	ENST00000534412	CABIN1	Q9Y6J0	2220 aa		6.27	□□□□□ -1.4
PICALM-223	ENST00000534412	RELN	P78509	3460 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	MDM4	O15151	490 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	EIF3D	O15371	548 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	TGFB1I1	O43294	461 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	LDOC1	O95751	146 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	WNT1	P04628	370 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	FAM200B	P0CF97	657 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	IDE	P14735	1019 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	HK1	P19367	917 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	HOXD9	P28356	352 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	HLA-F	P30511	346 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	CORO1A	P31146	461 aa	Known RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	C21orf59	P57076	290 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	MAP3K7CL	P57077	242 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	TMPRSS3	P57727	454 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	RPS14	P62263	151 aa	Known RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	SNRPF	P62306	86 aa	Known RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	PHC1	P78364	1004 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	COG7	P83436	770 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	CD69	Q07108	199 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	TRPC3	Q13507	836 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF699	Q32M78	642 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	TTC31	Q49AM3	519 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	TAF1B	Q53T94	588 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	C10orf120	Q5SQS8	335 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	RRAGB	Q5VZM2	374 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	KIAA0895L	Q68EN5	471 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	STXBP4	Q6ZWJ1	553 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	SCD5	Q86SK9	330 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ACOT1	Q86TX2	421 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	UNC93A	Q86WB7	457 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	LDLRAD3	Q86YD5	345 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	FMNL3	Q8IVF7	1028 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ULK2	Q8IYT8	1036 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF610	Q8N9Z0	462 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF248	Q8NDW4	579 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	PPP1R14C	Q8TAE6	165 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	GOLGA1	Q92805	767 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	CCDC127	Q96BQ5	260 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	HNRNPAB	Q99729	332 aa	Known RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	DCLK3	Q9C098	648 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	ERVMER34-1	Q9H9K5	563 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	EBF2	Q9HAK2	575 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	PRSS16	Q9NQE7	514 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	STOML2	Q9UJZ1	356 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	AGO1	Q9UL18	857 aa	Known RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	SCML1	Q9UN30	329 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	CLCA2	Q9UQC9	943 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	KNL1	Q8NG31	2342 aa		6.27	□□□□□ -1.41
PICALM-223	ENST00000534412	UBE4B	O95155	1302 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412		A0A087X0B3	334 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412		A0A1W2PR77	199 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412		H3BQV1	296 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	HOXA3	O43365	443 aa	Predicted RBP	6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	LY86	O95711	162 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	DNTT	P04053	509 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	CKMT2	P17540	419 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ABCB4	P21439	1286 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ACP1	P24666	158 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	GJB2	P29033	226 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	RXRG	P48443	463 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ARRB1	P49407	418 aa	Predicted RBP	6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	NDST1	P52848	882 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	AP3M2	P53677	418 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	NXPH1	P58417	271 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	DUSP2	Q05923	314 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.26	□□□□□ -1.41	2e-6	■■■■□ 20.8
PICALM-223	ENST00000534412	INCA1	Q0VD86	236 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	CCDC173	Q0VFZ6	552 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF667	Q5HYK9	610 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF776	Q68DI1	518 aa	Predicted RBP	6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	CCDC73	Q6ZRK6	1079 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	FRMD7	Q6ZUT3	714 aa		6.26	□□□□□ -1.41
PICALM-223	ENST00000534412	ZNF627	Q7L945	461 aa		6.26	□□□□□ -1.41

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