RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SPACA6W5XKT8 324 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 MAGEC1O60732 1142 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 ACADMP11310 421 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 ALOX12P18054 663 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 PTDSS1P48651 473 aaKnown RBP17.23■□□□□ 0.35
PHRF1-206ENST00000534320 NRLP54845 237 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 GNA12Q03113 381 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 FCHO2Q0JRZ9 810 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 HNRNPDQ14103 355 aaKnown RBP17.23■□□□□ 0.35
PHRF1-206ENST00000534320 FSTL4Q6MZW2 842 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 MARK2Q7KZI7 788 aaKnown RBP17.23■□□□□ 0.35
PHRF1-206ENST00000534320 ULK2Q8IYT8 1036 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 RBFAQ8N0V3 343 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 PSMB9P28065 219 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 MAPKAPK2P49137 400 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 BNIP1Q12981 228 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 NCBP2-AS2Q69YL0 99 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 UBASH3BQ8TF42 649 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 UGT2B28Q9BY64 529 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 SPAG4Q9NPE6 437 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 TMCC3Q9ULS5 477 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 BTBD3Q9Y2F9 522 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
PHRF1-206ENST00000534320 TCRBV7S3A2A0A539 114 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 LSM1O15116 133 aaKnown RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 IDH3BO43837 385 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ALDH1A2O94788 518 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 INHAP05111 366 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 AKR1D1P51857 326 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 C11orf88Q6PI97 169 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 C6orf62Q9GZU0 229 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 PIGVQ9NUD9 493 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 PLK2Q9NYY3 685 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ATXN10Q9UBB4 475 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SNX6Q9UNH7 406 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 TRAF6Q9Y4K3 522 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 RAI2Q9Y5P3 530 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SMIM31A0A1B0GVY4 71 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 PLIN3O60664 434 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ULK1O75385 1050 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SMNDC1O75940 238 aaKnown RBP eCLIP17.22■□□□□ 0.356e-7■■■■□ 25.7
PHRF1-206ENST00000534320 RPN2P04844 631 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 PBX3P40426 434 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ALDH9A1P49189 494 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ATG16L2Q8NAA4 619 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SLC39A8Q9C0K1 460 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SEMA6AQ9H2E6 1030 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 TK2O00142 265 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 FFAR3O14843 346 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 GPR42O15529 346 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 IRAK2O43187 625 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 GLUD1P00367 558 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 RRM2P31350 389 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 CDH5P33151 784 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 CDH4P55283 916 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 COX10Q12887 443 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ESRP1Q6NXG1 681 aaKnown RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SCIMPQ6UWF3 145 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 WDR55Q9H6Y2 383 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 TELO2Q9Y4R8 837 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SH3BGRLO75368 114 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 SP100P23497 879 aaPredicted RBP17.22■□□□□ 0.35
PHRF1-206ENST00000534320 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 ITFG1Q8TB96 612 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 TBATAQ96M53 351 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 CHID1Q9BWS9 393 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 MAGEH1Q9H213 219 aa17.22■□□□□ 0.35
PHRF1-206ENST00000534320 IPO13O94829 963 aaKnown RBP17.21■□□□□ 0.35
PHRF1-206ENST00000534320 KLHL18O94889 574 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 KCNH1O95259 989 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 OTCP00480 354 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 PUDPQ08623 228 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 C1DQ13901 141 aaKnown RBP17.21■□□□□ 0.35
PHRF1-206ENST00000534320 PLCL1Q15111 1095 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 KIAA0408Q6ZU52 694 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 CIR1Q86X95 450 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-206ENST00000534320 PPP3R2Q96LZ3 170 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 COPS8Q99627 209 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 LEF1Q9UJU2 399 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-206ENST00000534320 INVSQ9Y283 1065 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
PHRF1-206ENST00000534320 H7C0S8 307 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 ZNF554Q86TJ5 538 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 EFCAB3Q8N7B9 438 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 OR7D4Q8NG98 312 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 STYXQ8WUJ0 223 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 RORBQ92753 470 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 XYLT2Q9H1B5 865 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 SERHL2Q9H4I8 314 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 SERHLQ9NQF3 203 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 TRIM38O00635 465 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 HCRTO43612 131 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 GPR15P49685 360 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 GLIS1Q8NBF1 620 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 ACTRT2Q8TDY3 377 aa17.21■□□□□ 0.35
PHRF1-206ENST00000534320 ATL1Q8WXF7 558 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms