RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 ETV3P41162 512 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 GNPDA1P46926 289 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 CDK3Q00526 305 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 PEX6Q13608 980 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 CLPPQ16740 277 aaPredicted RBP16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 TMCO3Q6UWJ1 677 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 ZNF438Q7Z4V0 828 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 HSD11B1LQ7Z5J1 315 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 AOPEPQ8N6M6 819 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 NSMCE1Q8WV22 266 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 FRMD8Q9BZ67 464 aaPredicted RBP16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 B3GNT4Q9C0J1 378 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 NOD2Q9HC29 1040 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 GOLGA6AQ9NYA3 693 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 SUFUQ9UMX1 484 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 PCDHGA4Q9Y5G9 962 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 SCINQ9Y6U3 715 aa16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 ZFC3H1O60293 1989 aaKnown RBP16.85■□□□□ 0.29
CAPRIN1-216ENST00000534042 TLN1Q9Y490 2541 aaKnown RBP16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 PSMD11O00231 422 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 WISP1O95388 367 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 PEX11BO96011 259 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 TEAD1P28347 426 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 PCK1P35558 622 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 TRAF2Q12933 501 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 DPYSL2Q16555 572 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 BOLA3Q53S33 107 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 RALGPS1Q5JS13 557 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 RAET1GQ6H3X3 334 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 SLC30A9Q6PML9 568 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 Q6ZVL8 140 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 ZNF571Q7Z3V5 609 aaPredicted RBP16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 DTX1Q86Y01 620 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 CBARPQ8N350 705 aaPredicted RBP16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 PGBD5Q8N414 524 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 TRIM11Q96F44 468 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 MGME1Q9BQP7 344 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 NUDT22Q9BRQ3 303 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 MRPL47Q9HD33 250 aaKnown RBP16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 MYO1AQ9UBC5 1043 aa16.84■□□□□ 0.29
CAPRIN1-216ENST00000534042 NPIPB15A6NHN6 443 aaPredicted RBP16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 DDX3XO00571 662 aaKnown RBP eCLIP16.83■□□□□ 0.287e-43■■■■□ 20.8
CAPRIN1-216ENST00000534042 HGSO14964 777 aaPredicted RBP16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 MAFKO60675 156 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 PGLSO95336 258 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 IVLP07476 585 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 MYBL1P10243 752 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 SFTPCP11686 197 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 CCL4P13236 92 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 LHCGRP22888 699 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 IL1R2P27930 398 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 ADCY8P40145 1251 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 PRKCIP41743 596 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 GPR3P46089 330 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 POLD2P49005 469 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 MAXP61244 160 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 CTBSQ01459 385 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 KLHL30Q0D2K2 578 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 NR1D2Q14995 579 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 SMTNL2Q2TAL5 461 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 ARMC12Q5T9G4 340 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 TENM4Q6N022 2769 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 ZNF574Q6ZN55 896 aaPredicted RBP16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 POLNQ7Z5Q5 900 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 ATPAF2Q8N5M1 289 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 RCBTB1Q8NDN9 531 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 PTCD2Q8WV60 388 aaKnown RBP16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 PATE1Q8WXA2 126 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 HSPH1Q92598 858 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 COL26A1Q96A83 441 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 SCRN2Q96FV2 425 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 GBP4Q96PP9 640 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 ETNK2Q9NVF9 386 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 SLC17A4Q9Y2C5 497 aa16.83■□□□□ 0.28
CAPRIN1-216ENST00000534042 IGHV5-10-1A0A0J9YXX1 117 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 FAM87AP0C7U9 286 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 CD1CP29017 333 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 MMP13P45452 471 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 GPR1P46091 355 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 TBR1Q16650 682 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 FILIP1LQ4L180 1135 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 MARC1Q5VT66 337 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 DOK6Q6PKX4 331 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 USP45Q70EL2 814 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 TSPAN33Q86UF1 283 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 NAGSQ8N159 534 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 NDUFAF2Q8N183 169 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 CCDC74BQ96LY2 380 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 CSPG4P5Q96PW8 444 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 TAAR9Q96RI9 348 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 MCCC1Q96RQ3 725 aaPredicted RBP16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 NAT10Q9H0A0 1025 aaKnown RBP16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 CDH19Q9H159 772 aa16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.82■□□□□ 0.28
CAPRIN1-216ENST00000534042 STMND1H3BQB6 276 aa16.81■□□□□ 0.28
CAPRIN1-216ENST00000534042 PPM1DO15297 605 aa16.81■□□□□ 0.28
CAPRIN1-216ENST00000534042 RARAP10276 462 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms