RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SOX5P35711 763 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 NOP2P46087 812 aaKnown RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 ZNF143P52747 638 aaPredicted RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 NDST2P52849 883 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 MLLT10P55197 1068 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 SYCP1Q15431 976 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 CLPPQ16740 277 aaPredicted RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 RAET1GQ6H3X3 334 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 DCUN1D2Q6PH85 259 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 TRIM72Q6ZMU5 477 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 Q6ZVL8 140 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 HSD11B1LQ7Z5J1 315 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 FAM26EQ8N5C1 309 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 NLGN4YQ8NFZ3 816 aaPredicted RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 APOBEC4Q8WW27 367 aaKnown RBP13.01□□□□□ -0.33
COPB1-209ENST00000533096 ECHDC3Q96DC8 303 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 SLC45A3Q96JT2 553 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 COQ10AQ96MF6 247 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 MCEEQ96PE7 176 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 TEX101Q9BY14 249 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 PCSK1NQ9UHG2 260 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 CD84Q9UIB8 345 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 TUBD1Q9UJT1 453 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 PILRAQ9UKJ1 303 aa13.01□□□□□ -0.33
COPB1-209ENST00000533096 PRR19A6NJB7 356 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CAPN5O15484 640 aaPredicted RBP13□□□□□ -0.33
COPB1-209ENST00000533096 ASMTLO95671 621 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CALB1P05937 261 aa13□□□□□ -0.33
COPB1-209ENST00000533096 THRAP10827 490 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CTPS1P17812 591 aa13□□□□□ -0.33
COPB1-209ENST00000533096 TCN2P20062 427 aa13□□□□□ -0.33
COPB1-209ENST00000533096 OAS2P29728 719 aaKnown RBP13□□□□□ -0.33
COPB1-209ENST00000533096 CSF2RBP32927 897 aa13□□□□□ -0.33
COPB1-209ENST00000533096 GPR1P46091 355 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CDK3Q00526 305 aa13□□□□□ -0.33
COPB1-209ENST00000533096 NSUN2Q08J23 767 aaKnown RBP eCLIP13□□□□□ -0.33
COPB1-209ENST00000533096 NFATC2Q13469 925 aa13□□□□□ -0.33
COPB1-209ENST00000533096 SEPT6Q14141 434 aa13□□□□□ -0.33
COPB1-209ENST00000533096 BECN1Q14457 450 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CNGA3Q16281 694 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CA9Q16790 459 aa13□□□□□ -0.33
COPB1-209ENST00000533096 CLEC16AQ2KHT3 1053 aa13□□□□□ -0.33
COPB1-209ENST00000533096 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
COPB1-209ENST00000533096 TIPARPQ7Z3E1 657 aaKnown RBP13□□□□□ -0.33
COPB1-209ENST00000533096 TRIM74Q86UV6 250 aa13□□□□□ -0.33
COPB1-209ENST00000533096 TEX19Q8NA77 164 aa13□□□□□ -0.33
COPB1-209ENST00000533096 C3orf20Q8ND61 904 aa13□□□□□ -0.33
COPB1-209ENST00000533096 OR10G6Q8NH81 332 aa13□□□□□ -0.33
COPB1-209ENST00000533096 FNIP1Q8TF40 1166 aa13□□□□□ -0.33
COPB1-209ENST00000533096 RTP4Q96DX8 246 aa13□□□□□ -0.33
COPB1-209ENST00000533096 PSMG3-AS1Q96PY0 264 aa13□□□□□ -0.33
COPB1-209ENST00000533096 FRMD8Q9BZ67 464 aaPredicted RBP13□□□□□ -0.33
COPB1-209ENST00000533096 APMAPQ9HDC9 416 aa13□□□□□ -0.33
COPB1-209ENST00000533096 DONSONQ9NYP3 566 aa13□□□□□ -0.33
COPB1-209ENST00000533096 ZNHIT2Q9UHR6 403 aa13□□□□□ -0.33
COPB1-209ENST00000533096 SPTA1P02549 2419 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 B4E171 279 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 K7EM74 188 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 TRAFD1O14545 582 aaPredicted RBP12.99□□□□□ -0.33
COPB1-209ENST00000533096 VIPR1P32241 457 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 TSPAN7P41732 249 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 RENBPP51606 427 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 MC2RQ01718 297 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 CDC20Q12834 499 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 PEX6Q13608 980 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 NR1D2Q14995 579 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 LACTB2Q53H82 288 aaPredicted RBP12.99□□□□□ -0.33
COPB1-209ENST00000533096 TCP11X2Q5H9J9 407 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 PPP6R3Q5H9R7 873 aaPredicted RBP12.99□□□□□ -0.33
COPB1-209ENST00000533096 ATCAYQ86WG3 371 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 TP53INP2Q8IXH6 220 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 CNPY3Q9BT09 278 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 GANQ9H2C0 597 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 PRKAB1Q9Y478 270 aa12.99□□□□□ -0.33
COPB1-209ENST00000533096 MRPS18BQ9Y676 258 aaKnown RBP12.99□□□□□ -0.33
COPB1-209ENST00000533096 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 EPHB6O15197 1021 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 SNX2O60749 519 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 KATNA1O75449 491 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 STK17BO94768 372 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 HEXIM1O94992 359 aaKnown RBP12.98□□□□□ -0.33
COPB1-209ENST00000533096 MAP3K6O95382 1288 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 CPP00450 1065 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 KRT7P08729 469 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 CYP2A6P11509 494 aaPredicted RBP12.98□□□□□ -0.33
COPB1-209ENST00000533096 DESP17661 470 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 ERCC2P18074 760 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 TNFAIP3P21580 790 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 RAB15P59190 212 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 OGDHQ02218 1023 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 FOXM1Q08050 763 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 KLRB1Q12918 225 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 SQSTM1Q13501 440 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 ERV3-1Q14264 604 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 LBRQ14739 615 aaKnown RBP12.98□□□□□ -0.33
COPB1-209ENST00000533096 DPCR1Q3MIW9 517 aa12.98□□□□□ -0.33
COPB1-209ENST00000533096 CEACAM20Q6UY09 585 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms