RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 GLRX5Q86SX6 157 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 PARGQ86W56 976 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 FAM71DQ8N9W8 422 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 SCAMP4Q969E2 229 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 NUS1Q96E22 293 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 AGAP2Q99490 1192 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 TMEM121Q9BTD3 319 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 TEX101Q9BY14 249 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 TOR4AQ9NXH8 423 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 TRMT1Q9NXH9 659 aaKnown RBP13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 KCTD5Q9NXV2 234 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 RSPH14Q9UHP6 348 aa13.92□□□□□ -0.18
TSPAN4-220ENST00000532375 SPAARA0A1B0GVQ0 90 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 MED19A0JLT2 244 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 TMEM202A6NGA9 273 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 ZSCAN12O43309 604 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SDC3O75056 442 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 DKK1O94907 266 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 METTL18O95568 372 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 PTMAP06454 111 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 ITGAVP06756 1048 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 PSMB4P28070 264 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 CXCR5P32302 372 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 GRK6P43250 576 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SPINT3P49223 89 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 KIAA1024LP59773 190 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 OLIG2Q13516 323 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SLC1A5Q15758 541 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 ALG11Q2TAA5 492 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 KCTD11Q693B1 232 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 DENND5AQ6IQ26 1287 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 LYSMD3Q7Z3D4 306 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 NRSN1Q8IZ57 195 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 RBFAQ8N0V3 343 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SLC35F6Q8N357 371 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 RASGEF1CQ8N431 466 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 RHBDD1Q8TEB9 315 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SETD7Q8WTS6 366 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 C1orf54Q8WWF1 131 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 FRMD8P1Q9BZ68 369 aaPredicted RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 SLC32A1Q9H598 525 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 DNAJC28Q9NX36 388 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 CD84Q9UIB8 345 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 CNOT6Q9ULM6 557 aaKnown RBP13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 WASF3Q9UPY6 502 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 JRKLQ9Y4A0 524 aa13.91□□□□□ -0.18
TSPAN4-220ENST00000532375 NCOR2Q9Y618 2525 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 C1orf232A0A0U1RR37 186 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 TRIM38O00635 465 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 AGTP01019 485 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ATP1A1P05023 1023 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 TSHRP16473 764 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 THOP1P52888 689 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 PTK2BQ14289 1009 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 TRIP6Q15654 476 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 CCNG2Q16589 344 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ZNF569Q5MCW4 686 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 HENMT1Q5T8I9 393 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ITPRIPL1Q6GPH6 555 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 DRICH1Q6PGQ1 229 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 GLIS1Q8NBF1 620 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 IPMKQ8NFU5 416 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 OR1E3Q8WZA6 343 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 TSACCQ96A04 125 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 AP2M1Q96CW1 435 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 RIOK2Q9BVS4 552 aaKnown RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 CLPBQ9H078 707 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ZFYVE1Q9HBF4 777 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 FGF22Q9HCT0 170 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 SHOC2Q9UQ13 582 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ZNF711Q9Y462 761 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ARHGEF17Q96PE2 2063 aaPredicted RBP13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 ASXL3Q9C0F0 2248 aa13.9□□□□□ -0.18
TSPAN4-220ENST00000532375 RGSL1A5PLK6 1076 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 SCAMP1O15126 338 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 ZNF189O75820 626 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 ANXA9O76027 345 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 FGGP02679 453 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 CEACAM5P06731 702 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 JUNDP17535 347 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 HLA-DPA1P20036 260 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 STIP1P31948 543 aaKnown RBP13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 GEMP55040 296 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 HNRNPKP61978 463 aaKnown RBP eCLIP13.89□□□□□ -0.198e-6■■■■□ 19.7
TSPAN4-220ENST00000532375 CDK3Q00526 305 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 PARP6Q2NL67 630 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 ADAMTSL4Q6UY14 1074 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 HEATR4Q86WZ0 1026 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 PHACTR4Q8IZ21 702 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 SLC25A41Q8N5S1 370 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 EID2Q8N6I1 236 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 PRELID2Q8N945 189 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 GPR26Q8NDV2 337 aa13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 ZNF548Q8NEK5 533 aaPredicted RBP13.89□□□□□ -0.19
TSPAN4-220ENST00000532375 PTCD2Q8WV60 388 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms