RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 B4GALT6Q9UBX8 382 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 FZD10Q9ULW2 581 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 VPS4AQ9UN37 437 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PCDHB3Q9Y5E6 796 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 PCDHGC4Q9Y5F7 938 aa9.23□□□□□ -0.93
NEDD8-206ENST00000531430 USP9XQ93008 2570 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 RP1L1Q8IWN7 2480 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CCP110O43303 1012 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 PRAMEF11O60813 436 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 THRAP10827 490 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CHRNB2P17787 502 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 OAS2P29728 719 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 MAN1A1P33908 653 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 ETV3P41162 512 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 GPR1P46091 355 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 NSFP46459 744 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 COPB1P53618 953 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 RAB15P59190 212 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 MC1RQ01726 317 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CDR2Q01850 454 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 FOXM1Q08050 763 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 ERV3-1Q14264 604 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CLPPQ16740 277 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CEACAM20Q6UY09 585 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 TIPARPQ7Z3E1 657 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 ZNF438Q7Z4V0 828 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 UMODL1-AS1Q8N2C9 162 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 EPS8L1Q8TE68 723 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 FNIP1Q8TF40 1166 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CENPIQ92674 756 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 RTP4Q96DX8 246 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 PSMG3-AS1Q96PY0 264 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 VPS16Q9H269 839 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 DHX35Q9H5Z1 703 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 APMAPQ9HDC9 416 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 NLRC4Q9NPP4 1024 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 TRNAU1APQ9NX07 287 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 DONSONQ9NYP3 566 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 ZNHIT2Q9UHR6 403 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CD84Q9UIB8 345 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 PILRAQ9UKJ1 303 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 NEU3Q9UQ49 428 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 TP53TG5Q9Y2B4 290 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 MRPS18BQ9Y676 258 aaKnown RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 USP9YO00507 2555 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-206ENST00000531430 CREBBPQ92793 2442 aa9.22□□□□□ -0.93
NEDD8-206ENST00000531430 A0A0U1RQS6 177 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 SIGLEC16A6NMB1 481 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 WASH4PA8MWX3 477 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 B4E171 279 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 F8VZ95 297 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MKRN2OSH3BPM6 223 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 K7EM74 188 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 EEF2KO00418 725 aaKnown RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 POLR1CO15160 346 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 FGF10O15520 208 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 SNX2O60749 519 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 STK17BO94768 372 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MAP3K6O95382 1288 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 CYP1A1P04798 512 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 DESP17661 470 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 CTPS1P17812 591 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 GM2AP17900 193 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 GNLYP22749 145 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 CSF2RBP32927 897 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 TSPAN7P41732 249 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 CSNK1DP48730 415 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 NDST2P52849 883 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 POLR2FP61218 127 aaKnown RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 CDK3Q00526 305 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MC2RQ01718 297 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 FMO1Q01740 532 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 PTPRRQ15256 657 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MIIPQ5JXC2 388 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 FHL5Q5TD97 284 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 DPY19L2P1Q6NXN4 242 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 DNAJC24Q6P3W2 148 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ARHGAP36Q6ZRI8 547 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 Q6ZVL8 140 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ASB18Q6ZVZ8 466 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 HSD11B1LQ7Z5J1 315 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 C17orf82Q86X59 251 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ZNF677Q86XU0 584 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MLKLQ8NB16 471 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 STARD8Q92502 1023 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MIB2Q96AX9 1013 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 ELMO2Q96JJ3 720 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 TEFMQ96QE5 360 aaKnown RBP9.21□□□□□ -0.94
NEDD8-206ENST00000531430 PCDHB18PQ96TA0 734 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 DPYSL5Q9BPU6 564 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 TEX101Q9BY14 249 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 LRRC19Q9H756 370 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 PDFQ9HBH1 243 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 TAB2Q9NYJ8 693 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 MAP10Q9P2G4 905 aa9.21□□□□□ -0.94
NEDD8-206ENST00000531430 PLEKHB1Q9UF11 243 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms