RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 H3BM21 787 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 CACNB4O00305 520 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ANXA9O76027 345 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ADRB1P08588 477 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ATXN1LP0C7T5 689 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 TSHRP16473 764 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 JUNDP17535 347 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 SPINT3P49223 89 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 GEMP55040 296 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 KIAA1024LP59773 190 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 SIM1P81133 766 aaPredicted RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 PPARDQ03181 441 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ENPP7Q6UWV6 458 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ZNF765Q7L2R6 523 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 LYSMD3Q7Z3D4 306 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 TMC3Q7Z5M5 1100 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 EID2Q8N6I1 236 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 FAM71DQ8N9W8 422 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 ATL2Q8NHH9 583 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 CCDC110Q8TBZ0 833 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 CCHCR1Q8TD31 782 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 BTN2A2Q8WVV5 523 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 AP2M1Q96CW1 435 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 EID2BQ96D98 161 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 SPATA13Q96N96 652 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 GORASP1Q9BQQ3 440 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 LGR4Q9BXB1 951 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 TEX101Q9BY14 249 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 AAR2Q9Y312 384 aaKnown RBP12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 JRKLQ9Y4A0 524 aa12.65□□□□□ -0.38
CCDC90B-216ENST00000529856 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 NEMP2A6NFY4 417 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TMEM202A6NGA9 273 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PDE2AO00408 941 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TNFRSF10CO14798 259 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SCAMP1O15126 338 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TNFSF14O43557 240 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 LIASO43766 372 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 GCATO75600 419 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SOD1P00441 154 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PIRTP0C851 137 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 KELP23276 732 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PSMB4P28070 264 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 STIP1P31948 543 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SRP54P61011 504 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 FOXK2Q01167 660 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PRPSAP1Q14558 356 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 OASLQ15646 514 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC1A5Q15758 541 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 ALG11Q2TAA5 492 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SIRPB2Q5JXA9 342 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 FAXCQ5TGI0 409 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 RAET1GQ6H3X3 334 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 RBFAQ8N0V3 343 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 ZNF548Q8NEK5 533 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 IPMKQ8NFU5 416 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 ATG4AQ8WYN0 398 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SCAMP4Q969E2 229 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TSACCQ96A04 125 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TBATAQ96M53 351 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 WDR24Q96S15 920 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TMEM121Q9BTD3 319 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SLC13A1Q9BZW2 595 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TCEAL2Q9H3H9 227 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 WDR26Q9H7D7 661 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 ZFYVE1Q9HBF4 777 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PHPT1Q9NRX4 125 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 TRMT1Q9NXH9 659 aaKnown RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 PKD2L2Q9NZM6 624 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SPASTQ9UBP0 616 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 CD84Q9UIB8 345 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SHOC2Q9UQ13 582 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 ZNF711Q9Y462 761 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SPO11Q9Y5K1 396 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 CSNK1G3Q9Y6M4 447 aa12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 COL5A1P20908 1838 aaPredicted RBP12.64□□□□□ -0.39
CCDC90B-216ENST00000529856 SPTBN2O15020 2390 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 TRIM38O00635 465 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 ENC1O14682 589 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 AQP9O43315 295 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 CEP104O60308 925 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 RASGRP1O95267 797 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 AGTP01019 485 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 PYGLP06737 847 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 MYCLP1P12525 358 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 HLA-DPA1P20036 260 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 CXCR5P32302 372 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 ADRA1AP35348 466 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 CHRNA4P43681 627 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 TNNT3P45378 269 aaPredicted RBP12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 GPR1P46091 355 aa12.63□□□□□ -0.39
CCDC90B-216ENST00000529856 BLKP51451 505 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms