RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ERV3-1Q14264 604 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 GRM3Q14832 879 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 PTPRRQ15256 657 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 TCTN3Q6NUS6 607 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 CEACAM20Q6UY09 585 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 ARHGAP22Q7Z5H3 698 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 CCDC13Q8IYE1 715 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 PAF1Q8N7H5 531 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 FNIP1Q8TF40 1166 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 SLC20A1Q8WUM9 679 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 CENPIQ92674 756 aaPredicted RBP18.93■□□□□ 0.62
SSRP1-204ENST00000529002 ECHDC3Q96DC8 303 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 NUS1Q96E22 293 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 COQ10AQ96MF6 247 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 TEFMQ96QE5 360 aaKnown RBP18.93■□□□□ 0.62
SSRP1-204ENST00000529002 EFHD1Q9BUP0 239 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 TEX101Q9BY14 249 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 PHPT1Q9NRX4 125 aaPredicted RBP18.93■□□□□ 0.62
SSRP1-204ENST00000529002 PDP2Q9P2J9 529 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 KLHL3Q9UH77 587 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 TLK1Q9UKI8 766 aa18.93■□□□□ 0.62
SSRP1-204ENST00000529002 GOLGA6CA6NDK9 693 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 GOLGA6BA6NDN3 693 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 TTLL8A6PVC2 850 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 MKRN2OSH3BPM6 223 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 PDE2AO00408 941 aaPredicted RBP18.92■□□□□ 0.62
SSRP1-204ENST00000529002 DNAJB5O75953 348 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 EML2O95834 649 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 GOLGA6DP0CG33 693 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 ZNF28P17035 718 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 SERPINA4P29622 427 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 STAT5AP42229 794 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 PTPN9P43378 593 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 CDK3Q00526 305 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 MC1RQ01726 317 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 CNGA3Q16281 694 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 STRADAQ7RTN6 431 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 SLC30A5Q8TAD4 765 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 SLC37A2Q8TED4 501 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 AHCYL2Q96HN2 611 aaKnown RBP18.92■□□□□ 0.62
SSRP1-204ENST00000529002 TUBGCP5Q96RT8 1024 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 C11orf70Q9BRQ4 267 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 ATP13A3Q9H7F0 1226 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 GOLGA6AQ9NYA3 693 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 TMEM98Q9Y2Y6 226 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 KCTD3Q9Y597 815 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 RPS6KL1Q9Y6S9 549 aa18.92■□□□□ 0.62
SSRP1-204ENST00000529002 A0A0U1RQS6 177 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 PRAMEF11O60813 436 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 FGFR1OPO95684 399 aaKnown RBP18.91■□□□□ 0.62
SSRP1-204ENST00000529002 LSM8O95777 96 aaKnown RBP18.91■□□□□ 0.62
SSRP1-204ENST00000529002 ETV3P41162 512 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 PARP15Q460N3 678 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 SLFN11Q7Z7L1 901 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 UMODL1-AS1Q8N2C9 162 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 MSANTD4Q8NCY6 345 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 CPT1CQ8TCG5 803 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 NTAN1Q96AB6 310 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 SLC38A3Q99624 504 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 DPYSL5Q9BPU6 564 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 SRPK3Q9UPE1 567 aa18.91■□□□□ 0.62
SSRP1-204ENST00000529002 TRAFD1O14545 582 aaPredicted RBP18.9■□□□□ 0.62
SSRP1-204ENST00000529002 MAP3K6O95382 1288 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 TNFAIP3P21580 790 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 RFC1P35251 1148 aaPredicted RBP18.9■□□□□ 0.62
SSRP1-204ENST00000529002 DLSTP36957 453 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 MTIF2P46199 727 aaKnown RBP18.9■□□□□ 0.62
SSRP1-204ENST00000529002 GPLD1P80108 840 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 BCL2L1Q07817 233 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 SCYL2Q6P3W7 929 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 ARHGAP36Q6ZRI8 547 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 RFLNAQ6ZTI6 216 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 MARK2Q7KZI7 788 aaKnown RBP18.9■□□□□ 0.62
SSRP1-204ENST00000529002 HSD11B1LQ7Z5J1 315 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 TRIM74Q86UV6 250 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 EFCAB3Q8N7B9 438 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 GALNT11Q8NCW6 608 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 NCSTNQ92542 709 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 SLC39A8Q9C0K1 460 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 LRRC19Q9H756 370 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 FBXO8Q9NRD0 319 aa18.9■□□□□ 0.62
SSRP1-204ENST00000529002 CDC14CA4D256 554 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 WASH4PA8MWX3 477 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 PALMO75781 387 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 MAPK9P45984 424 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 CRTC2Q53ET0 693 aaPredicted RBP18.89■□□□□ 0.61
SSRP1-204ENST00000529002 OR10G6Q8NH81 332 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 EPS8L1Q8TE68 723 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 TRIM55Q9BYV6 548 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 GPATCH2LQ9NWQ4 482 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 CROTQ9UKG9 612 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 SLC17A4Q9Y2C5 497 aa18.89■□□□□ 0.61
SSRP1-204ENST00000529002 CRYBG3Q68DQ2 2970 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 DOPEY1Q5JWR5 2465 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 POLR1CO15160 346 aaPredicted RBP18.88■□□□□ 0.61
SSRP1-204ENST00000529002 KATNA1O75449 491 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 RFPL1O75677 317 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 IVLP07476 585 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 CHRNB2P17787 502 aa18.88■□□□□ 0.61
SSRP1-204ENST00000529002 MMP8P22894 467 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms