RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MAN1A1P33908 653 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 SERPINB6P35237 376 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 HSPA9P38646 679 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 MMP12P39900 470 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 PAPOLAP51003 745 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 DNA2P51530 1060 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 PFN3P60673 137 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 AP1S1P61966 158 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 IL10RBQ08334 325 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 NSUN2Q08J23 767 aaKnown RBP eCLIP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ELP6Q0PNE2 266 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 FZD2Q14332 565 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CYTH1Q15438 398 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 SLC18A3Q16572 532 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ASTE1Q2TB18 679 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 TMEM52BQ4KMG9 183 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 PPP6R3Q5H9R7 873 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 SPECC1LQ69YQ0 1117 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ALG1LQ6GMV1 187 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 LEKR1Q6ZMV7 388 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 GATAD2AQ86YP4 633 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 LRRC49Q8IUZ0 686 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 RYBPQ8N488 228 aaPredicted RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 FAM181AQ8N9Y4 354 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 EPS8L3Q8TE67 593 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ZCCHC14Q8WYQ9 949 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 FATE1Q969F0 183 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CENPTQ96BT3 561 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CNDP2Q96KP4 475 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 BMFQ96LC9 184 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 KLHL32Q96NJ5 620 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CSPG4P5Q96PW8 444 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 NUP85Q9BW27 656 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 C1QTNF7Q9BXJ2 289 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 XPO4Q9C0E2 1151 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 SLC39A8Q9C0K1 460 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ATP13A3Q9H7F0 1226 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 USP29Q9HBJ7 922 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 FZD3Q9NPG1 666 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 NLGN3Q9NZ94 848 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CWC15Q9P013 229 aaKnown RBP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 PCSK1NQ9UHG2 260 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 IP6K2Q9UHH9 426 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 GGT7Q9UJ14 662 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ANAPC7Q9UJX3 599 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ITM2BQ9Y287 266 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CA5BQ9Y2D0 317 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.12□□□□□ -1.27
ITGB1-218ENST00000528877 CSNK1G3Q9Y6M4 447 aa7.12□□□□□ -1.27
ITGB1-218ENST00000528877 ARID1BQ8NFD5 2236 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 IGSF10Q6WRI0 2623 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CFAP69A5D8W1 941 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 POM121BA6NF01 834 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 IGLON5A6NGN9 336 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ZNF487B1APH4 448 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 TRAFD1O14545 582 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 FPGTO14772 594 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SLC31A1O15431 190 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CBFA2T2O43439 604 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SOCS5O75159 536 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PIAS2O75928 621 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 KRT37O76014 449 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PIGNO95427 931 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 LDOC1O95751 146 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 GP1BAP07359 652 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CKMT2P17540 419 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CR2P20023 1033 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 DGKAP23743 735 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SERPINA4P29622 427 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 IGFALSP35858 605 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ARL4AP40617 200 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 RGRP47804 291 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 RENBPP51606 427 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ARSEP51690 589 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CLDN2P57739 230 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 HNRNPKP61978 463 aaKnown RBP eCLIP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 YPEL5P62699 121 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SGCGQ13326 291 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 CPSF6Q16630 551 aaKnown RBP eCLIP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 UGP2Q16851 508 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SMTNL2Q2TAL5 461 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 RALGPS1Q5JS13 557 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PRAMEF14Q5SWL7 426 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 TXNRD3NBQ6F5E7 133 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ALKBH5Q6P6C2 394 aaKnown RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 TMCO3Q6UWJ1 677 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 MACC1Q6ZN28 852 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 Q6ZSR6 202 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PTAR1Q7Z6K3 402 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 TMPRSS12Q86WS5 348 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ZSWIM9Q86XI8 627 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 VSIG1Q86XK7 387 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PROSER1Q86XN7 944 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ZNF354CQ86Y25 554 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 VSTM4Q8IW00 320 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 SLC25A45Q8N413 288 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 PNPLA1Q8N8W4 532 aa7.11□□□□□ -1.27
ITGB1-218ENST00000528877 TP53I13Q8NBR0 393 aaPredicted RBP7.11□□□□□ -1.27
ITGB1-218ENST00000528877 ZNF548Q8NEK5 533 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms