RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PDIA2Q13087 525 aaKnown RBP13.7□□□□□ -0.22
CD44-224ENST00000526669 FASTKD3Q14CZ7 662 aaKnown RBP13.7□□□□□ -0.22
CD44-224ENST00000526669 HIF1AQ16665 826 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ERCC6LQ2NKX8 1250 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ZNF284Q2VY69 593 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 TMC3Q7Z5M5 1100 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 IFT20Q8IY31 132 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ZCCHC9Q8N567 271 aaKnown RBP13.7□□□□□ -0.22
CD44-224ENST00000526669 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 UBXN4Q92575 508 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 NUS1Q96E22 293 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 DTD2Q96FN9 168 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 CFAP36Q96G28 342 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 COQ10AQ96MF6 247 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ZNF778Q96MU6 729 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 SLC17A9Q9BYT1 436 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 IL22Q9GZX6 179 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 DUSP15Q9H1R2 295 aaPredicted RBP13.7□□□□□ -0.22
CD44-224ENST00000526669 TRABDQ9H4I3 376 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 SAYSD1Q9NPB0 183 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 CHRAC1Q9NRG0 131 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ZDHHC18Q9NUE0 388 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 IL17CQ9P0M4 197 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 SLC2A6Q9UGQ3 507 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 FKBPLQ9UIM3 349 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 NFU1Q9UMS0 254 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 CABIN1Q9Y6J0 2220 aa13.7□□□□□ -0.22
CD44-224ENST00000526669 HEATR9A2RTY3 570 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 C2orf81A6NN90 581 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PSMD11O00231 422 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 RAD51BO15315 384 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PPFIA2O75334 1257 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PCCBP05166 539 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 BPIP17213 487 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ADRA1DP25100 572 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 NMBRP28336 390 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ECHS1P30084 290 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ELK3P41970 407 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PTGER3P43115 390 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SPINT3P49223 89 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 CCR5P51681 352 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 NUBP1P53384 320 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 CAV1Q03135 178 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 TCF15Q12870 199 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SGCGQ13326 291 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SIM2Q14190 667 aaPredicted RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 IRF4Q15306 451 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PLK5Q496M5 336 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SETMARQ53H47 684 aaPredicted RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 DNAJC21Q5F1R6 531 aaKnown RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 PCID2Q5JVF3 399 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 TSTD2Q5T7W7 516 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PMS2CLQ68D20 193 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 NEK5Q6P3R8 708 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 LPCAT2Q7L5N7 544 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 TECPR1Q7Z6L1 1165 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 IGDCC3Q8IVU1 814 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PDIK1LQ8N165 341 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PELI3Q8N2H9 469 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SCAMP4Q969E2 229 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ZNF669Q96BR6 464 aaPredicted RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 RANBP9Q96S59 729 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 WDR83Q9BRX9 315 aaKnown RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 MIR1-1HGQ9H1L0 117 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ABCG8Q9H221 673 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 MBNL1Q9NR56 388 aaKnown RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 SAMD15Q9P1V8 674 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 EIF2B4Q9UI10 523 aaKnown RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 SOX13Q9UN79 622 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.69□□□□□ -0.22
CD44-224ENST00000526669 PKP3Q9Y446 797 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 PCDHGA2Q9Y5H1 932 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 SLCO1B1Q9Y6L6 691 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 BPTFQ12830 3046 aa13.69□□□□□ -0.22
CD44-224ENST00000526669 VPS13AQ96RL7 3174 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 METTL12A8MUP2 240 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 AP3B1O00203 1094 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 WNT9AO14904 365 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 LILRB5O75023 590 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 MYBL2P10244 700 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 IGFALSP35858 605 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 HMGCLP35914 325 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 ARSDP51689 593 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 CLDN2P57739 230 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 ESRP1Q6NXG1 681 aaKnown RBP13.68□□□□□ -0.22
CD44-224ENST00000526669 FAM151BQ6UXP7 276 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 CBARPQ8N350 705 aaPredicted RBP13.68□□□□□ -0.22
CD44-224ENST00000526669 TP53I13Q8NBR0 393 aaPredicted RBP13.68□□□□□ -0.22
CD44-224ENST00000526669 PLA2G15Q8NCC3 412 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 STYXQ8WUJ0 223 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 MFSD3Q96ES6 412 aa13.68□□□□□ -0.22
CD44-224ENST00000526669 STAMBPL1Q96FJ0 436 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms