RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 FBXO4Q9UKT5 387 aa6.49□□□□□ -1.37
CD44-214ENST00000525211 TPX2Q9ULW0 747 aaKnown RBP6.49□□□□□ -1.37
CD44-214ENST00000525211 PHTF1Q9UMS5 762 aa6.49□□□□□ -1.37
CD44-214ENST00000525211 NOVA2Q9UNW9 492 aaKnown RBP6.49□□□□□ -1.37
CD44-214ENST00000525211 ZNF711Q9Y462 761 aa6.49□□□□□ -1.37
CD44-214ENST00000525211 PCYT1BQ9Y5K3 369 aaPredicted RBP6.49□□□□□ -1.37
CD44-214ENST00000525211 MUC6Q6W4X9 2439 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 KNL1Q8NG31 2342 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 PLXNA2O75051 1894 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3DA0A087WVF3 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3IA0A087WXS9 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3EA0A087X179 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3KA0A087X1G2 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3FA6NER0 549 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 POM121BA6NF01 834 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 METTL12A8MUP2 240 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 FADS2P1A8MWK0 482 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 PATE3B3GLJ2 98 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3LB9A6J9 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 SCAMP1O15126 338 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 AP1G1O43747 822 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A9O60656 530 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 RPP40O75818 363 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 PIAS1O75925 651 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 RECQL5O94762 991 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 ALDH1A2O94788 518 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 STK10O94804 968 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 PCDH8O95206 1070 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 EPOP01588 193 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 FAM153BP0C7A2 387 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3HP0C7X1 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 BPIP17213 487 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A6P19224 532 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TPSB2P20231 275 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A1P22309 533 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A4P22310 534 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 CES1P23141 567 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ITPKAP23677 461 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ARNTP27540 789 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 NMBRP28336 390 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A3P35503 534 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A5P35504 534 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 MAPK8P45983 427 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ZNF140P52738 457 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 EPHB1P54762 984 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 GUCY2DQ02846 1103 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ZBTB16Q05516 673 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 DHX9Q08211 1270 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 TUBB2AQ13885 445 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 PRPSAP1Q14558 356 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TPSAB1Q15661 275 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 FAM153CQ494X1 144 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 KHDC1Q4VXA5 237 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 TEX35Q5T0J7 233 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TMEM164Q5U3C3 297 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ALS2CLQ60I27 953 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 KIAA0895LQ68EN5 471 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3GQ6DHY5 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3CQ6IPX1 549 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ESRP1Q6NXG1 681 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 BRAT1Q6PJG6 821 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 GCNT7Q6ZNI0 430 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 USP30Q70CQ3 517 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 VASH1Q7L8A9 365 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 DSG4Q86SJ6 1040 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TRIM74Q86UV6 250 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 HORMAD1Q86X24 394 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 PPIL6Q8IXY8 311 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TBC1D3Q8IZP1 549 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 CEP112Q8N8E3 955 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TP53I13Q8NBR0 393 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 OR2T34Q8NGX1 318 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 CCDC26Q8TAB7 109 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 FBXO25Q8TCJ0 367 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 HCAR2Q8TDS4 363 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 GRK7Q8WTQ7 553 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 GAB3Q8WWW8 586 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ART4Q93070 314 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 IFT43Q96FT9 208 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 LRIG1Q96JA1 1093 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 DNAJC1Q96KC8 554 aaKnown RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 SIGLEC10Q96LC7 697 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 HSPA12BQ96MM6 686 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 SLC6A18Q96N87 628 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 SERPINB12Q96P63 405 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 LYSMD1Q96S90 227 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 TUBB2BQ9BVA1 445 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 C1QTNF1Q9BXJ1 281 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 BTBD1Q9H0C5 482 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 FAM96AQ9H5X1 160 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 SUDS3Q9H7L9 328 aaPredicted RBP6.48□□□□□ -1.37
CD44-214ENST00000525211 LRRC40Q9H9A6 602 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A7Q9HAW7 530 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A10Q9HAW8 530 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 UGT1A8Q9HAW9 530 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 LRRC4CQ9HCJ2 640 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 CHRAC1Q9NRG0 131 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 VPS45Q9NRW7 570 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 ZSCAN32Q9NX65 697 aa6.48□□□□□ -1.37
CD44-214ENST00000525211 IL17CQ9P0M4 197 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms