RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 CD93Q9NPY3 652 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 RAD18Q9NS91 495 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 C20orf96Q9NUD7 363 aaPredicted RBP15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 EBF1Q9UH73 591 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 FKBPLQ9UIM3 349 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 CYP8B1Q9UNU6 501 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 VCANP13611 3396 aa15.82■□□□□ 0.12
TSPAN4-213ENST00000524895 PRR23AA6NEV1 266 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 GOLGA8CPA6NN73 597 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 LZTS3O60299 673 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 MMP20O60882 483 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ZNF217O75362 1048 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 IGLV3-19P01714 112 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 BPIP17213 487 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 OXTRP30559 389 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 SPAM1P38567 509 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ETV3P41162 512 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 PXNP49023 591 aaPredicted RBP15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 SPINT3P49223 89 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ARSDP51689 593 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 FRG1Q14331 258 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 SLC29A2Q14542 456 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ZDHHC20Q5W0Z9 365 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ALS2CLQ60I27 953 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 PDPK2PQ6A1A2 396 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 KIAA1161Q6NSJ0 714 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 TRMT10BQ6PF06 316 aaKnown RBP15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 AFTPHQ6ULP2 937 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 MAMSTRQ6ZN01 415 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 KCNMB4Q86W47 210 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 OTUD6BQ8N6M0 293 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 FBF1Q8TES7 1133 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 ANKRD7Q92527 254 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 HDAC10Q969S8 669 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 CDKN2AIPNLQ96HQ2 116 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 TBATAQ96M53 351 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 EPB41L4BQ9H329 900 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 KDM4CQ9H3R0 1056 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 SGK2Q9HBY8 427 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 IL1RAPL1Q9NZN1 696 aa15.81■□□□□ 0.12
TSPAN4-213ENST00000524895 TECTAO75443 2155 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 SCN8AQ9UQD0 1980 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3DA0A087WVF3 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3IA0A087WXS9 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3EA0A087X179 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3KA0A087X1G2 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 GLYATL1P3A0A0U1RQE8 302 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 CCDC162PA2VCL2 907 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 RGSL1A5PLK6 1076 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3FA6NER0 549 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 FAM47DPA6NHR8 397 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 LRRC72A6NJI9 287 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3LB9A6J9 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 WNT9AO14904 365 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 RNGTTO60942 597 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3HP0C7X1 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 PSMA3P25788 255 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 MC4RP32245 332 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 RPS21P63220 83 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 MGAT5Q09328 741 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 THOC5Q13769 683 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TMEM31Q5JXX7 168 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3GQ6DHY5 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3CQ6IPX1 549 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 FAM151BQ6UXP7 276 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 RAVER1Q8IY67 606 aaKnown RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 UNC5BQ8IZJ1 945 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 TBC1D3Q8IZP1 549 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 CBARPQ8N350 705 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 GABPB2Q8TAK5 448 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 CDKL2Q92772 493 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 COQ10AQ96MF6 247 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 PLEKHG4BQ96PX9 1271 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 FAM167BQ9BTA0 163 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 ACSS3Q9H6R3 686 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 SUDS3Q9H7L9 328 aaPredicted RBP15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 CD84Q9UIB8 345 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 APPL1Q9UKG1 709 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 COQ6Q9Y2Z9 468 aa15.8■□□□□ 0.12
TSPAN4-213ENST00000524895 A0A1W2PQU0 124 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 IGLON5A6NGN9 336 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 GOLGA8KD6RF30 607 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 GOLGA8TH3BQL2 631 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 H7C0S8 307 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 K7ESF4 209 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 LAMTOR5O43504 91 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 TM7SF2O76062 418 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 PRAMEF1O95521 474 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 SEMA4FO95754 770 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 GOT2P00505 430 aaKnown RBP15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 ERVK-10P10266 1014 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 ARNTP27540 789 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 ACSL1P33121 698 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 ARCN1P48444 511 aaKnown RBP15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 PTPN5P54829 565 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 DCDC1P59894 354 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 KLHL38Q2WGJ6 581 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 HSP90AA5PQ58FG0 334 aa15.79■□□□□ 0.12
TSPAN4-213ENST00000524895 SEL1L3Q68CR1 1132 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms