RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	RECQL4	O94761	1208 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	LRIG2	O94898	1065 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	MT-CYB	P00156	380 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	FGF4	P08620	206 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	NCAM1	P13591	858 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ADRA1A	P35348	466 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TMED10	P49755	219 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	DAOA	P59103	153 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	RPS6KA2	Q15349	733 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	UGT3A2	Q3SY77	523 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZNF618	Q5T7W0	954 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	EGFLAM	Q63HQ2	1017 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	NOTUM	Q6P988	496 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GALNT18	Q6P9A2	607 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TOP6BL	Q8N6T0	577 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	USP33	Q8TEY7	942 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZC3H15	Q8WU90	426 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	LRCH3	Q96II8	777 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	C3orf30	Q96M34	536 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	BEGAIN	Q9BUH8	593 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ULBP1	Q9BZM6	244 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ING2	Q9H160	280 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	RAD21L1	Q9H4I0	556 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	FANCE	Q9HB96	536 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	NRCAM	Q92823	1304 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	C1orf232	A0A0U1RR37	186 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CCDC162P	A2VCL2	907 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141		J3QRK9	145 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CLDN5	O00501	218 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ABCB7	O75027	752 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ADAM23	O75077	832 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	E2F6	O75461	281 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	BEST1	O76090	585 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	SNAP29	O95721	258 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	LBP	P18428	481 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	MATN1	P21941	496 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GMPS	P49915	693 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	MTA1	Q13330	715 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CAPRIN1	Q14444	709 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	KCTD2	Q14681	263 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CBX2	Q14781	532 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GEN1	Q17RS7	908 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	MINDY2	Q8NBR6	621 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	FBXL8	Q96CD0	374 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CELF6	Q96J87	481 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GLT1D1	Q96MS3	346 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	PPP1R10	Q96QC0	940 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZNF347	Q96SE7	839 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	MED10	Q9BTT4	135 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GIN1	Q9NXP7	522 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZNF232	Q9UNY5	417 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TRIM17	Q9Y577	477 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	DNAJC15	Q9Y5T4	150 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TCRBV5S2	A0A599	114 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TMEM247	A6NEH6	219 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	C16orf96	A6NNT2	1141 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	YJEFN3	A6XGL0	299 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	HOXA11	P31270	313 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CXCR3	P49682	368 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	GSK3B	P49841	420 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ARHGAP1	Q07960	439 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	FSCN1	Q16658	493 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	RBM48	Q5RL73	367 aa	Known RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	HECTD2	Q5U5R9	776 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	PRAMEF18	Q5VWM3	479 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	PM20D1	Q6GTS8	502 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZNF280D	Q6N043	979 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	BLOC1S3	Q6QNY0	202 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	CATSPER4	Q7RTX7	472 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	RAB44	Q7Z6P3	723 aa	Predicted RBP	10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TWIST2	Q8WVJ9	160 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TMEM125	Q96AQ2	219 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	IL12RB2	Q99665	862 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	TKTL2	Q9H0I9	626 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	ALG9	Q9H6U8	611 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	HMG20A	Q9NP66	347 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	VWA7	Q9Y334	891 aa		10.26	□□□□□ -0.77
SPIDR-225	ENST00000524141	DNAJC25-GNG10	A0A024R161	153 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141		A0A1W2PP18	115 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	HTR3E	A5X5Y0	456 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	UBXN8	O00124	270 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	DFFA	O00273	331 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	AURKA	O14965	403 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	AZIN1	O14977	448 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	DPEP1	P16444	411 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	HOXD12	P35452	270 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	MAP3K7CL	P57077	242 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	EEFSEC	P57772	596 aa	Known RBP	10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	RPS3A	P61247	264 aa	Known RBP	10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	GNA12	Q03113	381 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	OCA2	Q04671	838 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	GRIK2	Q13002	908 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	ITGAD	Q13349	1161 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	NFYC	Q13952	458 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	ZNF846	Q147U1	533 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	PLCL1	Q15111	1095 aa		10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	PCBP1	Q15365	356 aa	Known RBP eCLIP	10.25	□□□□□ -0.77
SPIDR-225	ENST00000524141	UNC50	Q53HI1	259 aa		10.25	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms