RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KCTD3Q9Y597 815 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 OAS3Q9Y6K5 1087 aaKnown RBP11.62□□□□□ -0.55
SDCBP-211ENST00000523441 RPS6KL1Q9Y6S9 549 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 PRRC2CQ9Y520 2896 aaKnown RBP11.62□□□□□ -0.55
SDCBP-211ENST00000523441 ESPL1Q14674 2120 aa11.62□□□□□ -0.55
SDCBP-211ENST00000523441 TSPAN11A1L157 253 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 PDE2AO00408 941 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 POLR1CO15160 346 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 RFPL1O75677 317 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MMEP08473 750 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 CYP11B1P15538 503 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 ZNF28P17035 718 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 GM2AP17900 193 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 DCTP40126 519 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 ADCY8P40145 1251 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 STAT5AP42229 794 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MTIF2P46199 727 aaKnown RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 GABRB2P47870 512 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MC2RQ01718 297 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 BCL2L1Q07817 233 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 ABHD18Q0P651 414 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 CHAF1BQ13112 559 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MRPL49Q13405 166 aaKnown RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 NR1D2Q14995 579 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 AGERQ15109 404 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 PTPRRQ15256 657 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 NADK2Q4G0N4 442 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 PRR30Q53SZ7 412 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 INO80DQ53TQ3 878 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 RAET1GQ6H3X3 334 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 TRIM74Q86UV6 250 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 C17orf82Q86X59 251 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 RTL3Q8N8U3 475 aaKnown RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 TSEN2Q8NCE0 465 aaKnown RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 GALNT6Q8NCL4 622 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MSANTD4Q8NCY6 345 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 CASKIN2Q8WXE0 1202 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 ULBP3Q9BZM4 244 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 TWSG1Q9GZX9 223 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 SIX2Q9NPC8 291 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 RCOR3Q9P2K3 495 aaPredicted RBP11.61□□□□□ -0.55
SDCBP-211ENST00000523441 CD84Q9UIB8 345 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 CROTQ9UKG9 612 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 MED13Q9UHV7 2174 aa11.61□□□□□ -0.55
SDCBP-211ENST00000523441 A0A0U1RQS6 177 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 PIPSLA2A3N6 862 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 A6NCN8 305 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 PES1O00541 588 aaKnown RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 MAN1A1P33908 653 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 TRIM23P36406 574 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 ETV3P41162 512 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 PPP1R2P41236 205 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 SEPHS1P49903 392 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 MARSP56192 900 aaKnown RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 CLPPQ16740 277 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 TCTN3Q6NUS6 607 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 DPPA4Q7L190 304 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 BNIPLQ7Z465 357 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 NOP9Q86U38 636 aaKnown RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 GALNT11Q8NCW6 608 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 SLC30A5Q8TAD4 765 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 SLC37A2Q8TED4 501 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 ZNF641Q96N77 438 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 CINPQ9BW66 212 aaPredicted RBP11.6□□□□□ -0.55
SDCBP-211ENST00000523441 MFRPQ9BY79 579 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 TRIM55Q9BYV6 548 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 POLHQ9Y253 713 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 ATP6V1DQ9Y5K8 247 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 SHANK1Q9Y566 2161 aa11.6□□□□□ -0.55
SDCBP-211ENST00000523441 CXorf51AA0A1B0GTR3 108 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SNX2O60749 519 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 PALMO75781 387 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 FGFR1OPO95684 399 aaKnown RBP11.59□□□□□ -0.55
SDCBP-211ENST00000523441 CLDN1O95832 211 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 EML2O95834 649 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 ERCC5P28715 1186 aaPredicted RBP11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SCNN1AP37088 669 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SCNN1BP51168 640 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 HDAC4P56524 1084 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 BPIFB4P59827 614 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 CDK3Q00526 305 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 NRG1Q02297 640 aaPredicted RBP11.59□□□□□ -0.55
SDCBP-211ENST00000523441 GRM3Q14832 879 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 HSP90AA4PQ58FG1 418 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SLFN11Q7Z7L1 901 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 RASGRP3Q8IV61 690 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 FAM71AQ8IYT1 594 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 ESX1Q8N693 406 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SLC20A1Q8WUM9 679 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 FRMD8Q9BZ67 464 aaPredicted RBP11.59□□□□□ -0.55
SDCBP-211ENST00000523441 SPRY4Q9C004 299 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 TRIT1Q9H3H1 467 aaKnown RBP11.59□□□□□ -0.55
SDCBP-211ENST00000523441 GPATCH2LQ9NWQ4 482 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 TRNAU1APQ9NX07 287 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms