RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 EPHB1P54762 984 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 OGFOD3Q6PK18 319 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 MFSD7Q6UXD7 560 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 RFX6Q8HWS3 928 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 FAM46DQ8NEK8 389 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 NAT6Q93015 286 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 SCAMP4Q969E2 229 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 CCDC74AQ96AQ1 378 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 ATXN7L3BQ96GX2 97 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 AGAP2Q99490 1192 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
SPIDR-220ENST00000522900 ABCG8Q9H221 673 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 GOLPH3Q9H4A6 298 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 PHPT1Q9NRX4 125 aaPredicted RBP18.66■□□□□ 0.58
SPIDR-220ENST00000522900 GOLGA6AQ9NYA3 693 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 SHROOM3Q8TF72 1996 aa18.66■□□□□ 0.58
SPIDR-220ENST00000522900 PDE2AO00408 941 aaPredicted RBP18.65■□□□□ 0.58
SPIDR-220ENST00000522900 CLDN7O95471 211 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 CD86P42081 329 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 SLC1A1P43005 524 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 MAGEA1P43355 309 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 DYNLT1P63172 113 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 SKOR1P84550 965 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 CDK3Q00526 305 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 DPTQ07507 201 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 LLGL1Q15334 1064 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 RAET1GQ6H3X3 334 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 VSIG1Q86XK7 387 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 NRROSQ86YC3 692 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 RHOT1Q8IXI2 618 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 NDUFAF2Q8N183 169 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 LPCAT1Q8NF37 534 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 GPR156Q8NFN8 814 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.65■□□□□ 0.58
SPIDR-220ENST00000522900 ZNF830Q96NB3 372 aaPredicted RBP18.65■□□□□ 0.58
SPIDR-220ENST00000522900 FRMD8Q9BZ67 464 aaPredicted RBP18.65■□□□□ 0.58
SPIDR-220ENST00000522900 RBSNQ9H1K0 784 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 CARS2Q9HA77 564 aaKnown RBP18.65■□□□□ 0.58
SPIDR-220ENST00000522900 PCDH9Q9HC56 1237 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 KCTD5Q9NXV2 234 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 ENTPD2Q9Y5L3 495 aa18.65■□□□□ 0.58
SPIDR-220ENST00000522900 PMS2P1A4D2B8 440 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 CAPN8A6NHC0 703 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 NTN3O00634 580 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 NOBOXO60393 691 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 NOP2P46087 812 aaKnown RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 GPR1P46091 355 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 STC1P52823 247 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 GABREP78334 506 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 CCL7P80098 99 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 IFI35P80217 286 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 AP1B1Q10567 949 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 RBM44Q6ZP01 1051 aaKnown RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 FGF11Q92914 225 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 AP2M1Q96CW1 435 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 OLFM3Q96PB7 478 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 SYNDIG1Q9H7V2 258 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 SPATS2LQ9NUQ6 558 aaKnown RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 SAE1Q9UBE0 346 aaPredicted RBP18.64■□□□□ 0.57
SPIDR-220ENST00000522900 SUFUQ9UMX1 484 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 TMEM98Q9Y2Y6 226 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 ST14Q9Y5Y6 855 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 ALG6Q9Y672 507 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 ASXL3Q9C0F0 2248 aa18.64■□□□□ 0.57
SPIDR-220ENST00000522900 LRP4O75096 1905 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 A0A1W2PQM1 296 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 SPOPO43791 374 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 KRT10P13645 584 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 TEAD1P28347 426 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 GNPDA1P46926 289 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 LSSP48449 732 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 PDX1P52945 283 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 QPCTQ16769 361 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 TBC1D25Q3MII6 688 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 DOK6Q6PKX4 331 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 PDZD3Q86UT5 571 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 TRIM74Q86UV6 250 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 SNIP1Q8TAD8 396 aaKnown RBP18.63■□□□□ 0.57
SPIDR-220ENST00000522900 GPBAR1Q8TDU6 330 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 WDR24Q96S15 920 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 RIOK2Q9BVS4 552 aaKnown RBP18.63■□□□□ 0.57
SPIDR-220ENST00000522900 DPEP2Q9H4A9 486 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 POLR1BQ9H9Y6 1135 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 HAUS2Q9NVX0 235 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 DDX56Q9NY93 547 aaKnown RBP18.63■□□□□ 0.57
SPIDR-220ENST00000522900 SEPT10Q9P0V9 454 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 SATB2Q9UPW6 733 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 PLEKHM1Q9Y4G2 1056 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
SPIDR-220ENST00000522900 URB1O60287 2271 aaKnown RBP18.63■□□□□ 0.57
SPIDR-220ENST00000522900 COL27A1Q8IZC6 1860 aaPredicted RBP18.63■□□□□ 0.57
SPIDR-220ENST00000522900 ADAMTS20P59510 1910 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 CELSR3Q9NYQ7 3312 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 LAMA5O15230 3695 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 B4DGG1 531 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 TCEA3O75764 348 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 LCA5LO95447 670 aa18.62■□□□□ 0.57
SPIDR-220ENST00000522900 HOXB3P14651 431 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ZFXP17010 805 aaPredicted RBP18.62■□□□□ 0.57
SPIDR-220ENST00000522900 ZNF30P17039 623 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms