RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 TMEM120AQ9BXJ8 343 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 TP63Q9H3D4 680 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ABHD16BQ9H3Z7 469 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PPCSQ9HAB8 311 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PTPRHQ9HD43 1115 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PXMP2Q9NR77 195 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.45□□□□□ -1.86
VPS13B-209ENST00000521559 PLK2Q9NYY3 685 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 SELENONQ9NZV5 590 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 UBIAD1Q9Y5Z9 338 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 LAMB1P07942 1786 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 OTOFQ9HC10 1997 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 UTRNP46939 3433 aa3.45□□□□□ -1.86
VPS13B-209ENST00000521559 ASTN1O14525 1302 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 LAMA4Q16363 1823 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 GOLGA6L3A6NEY3 463 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 A6NNC1 897 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 EFCAB8A8MWE9 144 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 KCNJ18B7U540 433 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 H0YGN5 161 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CYBAP13498 195 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 SYT1P21579 422 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 U2AF2P26368 475 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CCND2P30279 289 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CCND3P30281 292 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 AKT1P31749 480 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 ICAM3P32942 547 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 ADPRHP54922 357 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 UBXN2AP68543 259 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 SHC2P98077 582 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 PMPCAQ10713 525 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 NONOQ15233 471 aaKnown RBP eCLIP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 TBRG1Q3YBR2 411 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 Q5PR19 223 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 UBAP2Q5T6F2 1119 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 ATPAF1Q5TC12 328 aaPredicted RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 MOXD1Q6UVY6 613 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 SEPT14Q6ZU15 432 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 NIPA1Q7RTP0 329 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CAMK1DQ8IU85 385 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 IQCF1Q8N6M8 205 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 TRPV1Q8NER1 839 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 B4GALNT2Q8NHY0 566 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 IPO4Q8TEX9 1081 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 SCFD2Q8WU76 684 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 POF1BQ8WVV4 589 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 TRIM63Q969Q1 353 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 ADAD1Q96M93 576 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 NAP1L4Q99733 375 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 MXRA8Q9BRK3 442 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 WDR12Q9GZL7 423 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 SPAG4Q9NPE6 437 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 WNT16Q9UBV4 365 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CDC23Q9UJX2 597 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 RAB21Q9UL25 225 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 MTMR6Q9Y217 621 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 CNPY2Q9Y2B0 182 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 DDX49Q9Y6V7 483 aaKnown RBP3.44□□□□□ -1.86
VPS13B-209ENST00000521559 AK9Q5TCS8 1911 aa3.44□□□□□ -1.86
VPS13B-209ENST00000521559 LOC285556D6RIA3 1793 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 PHIPQ8WWQ0 1821 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 IGLV3-22A0A075B6J6 115 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 VPS37CA5D8V6 355 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 MBD3L5A6NJ08 208 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 KIF28PB7ZC32 967 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 MCIDASD6RGH6 385 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 FAM86B1E9PN63 330 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 SEPT4O43236 478 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 FIBPO43427 364 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 STX6O43752 255 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 DUSP11O75319 330 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 TCEA3O75764 348 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 RPP40O75818 363 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 FAM86B2P0C5J1 330 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 CCL5P13501 91 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 HOXB2P14652 356 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 GCFC2P16383 781 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 CAPN2P17655 700 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 RFX2P48378 723 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 PCP4P48539 62 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 TRAPPC10P48553 1259 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ENTPD1P49961 510 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 RASSF2P50749 326 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 FOXL2P58012 376 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ZXDBP98169 803 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 SF3A3Q12874 501 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 ORC2Q13416 577 aaPredicted RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 DHX8Q14562 1220 aaKnown RBP3.43□□□□□ -1.86
VPS13B-209ENST00000521559 KRT72Q14CN4 511 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 LETM2Q2VYF4 491 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 DUSP28Q4G0W2 176 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 CEP55Q53EZ4 464 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 WASHC2DQ5SRD0 308 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 NUGGCQ68CJ6 796 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 HMBOX1Q6NT76 420 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 KDELC2Q7Z4H8 507 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 PLA2G4DQ86XP0 818 aa3.43□□□□□ -1.86
VPS13B-209ENST00000521559 KLBQ86Z14 1044 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms