RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CMTM3Q96MX0 182 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 DDX4Q9NQI0 724 aaKnown RBP6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 SLC45A1Q9Y2W3 748 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 INSRP06213 1382 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 TIAM1Q13009 1591 aa6.77□□□□□ -1.33
NUDCD1-204ENST00000521439 ZMYM4Q5VZL5 1548 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 FRMD3A2A2Y4 597 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 DYTNA2CJ06 578 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 INO80B-WBP1J3KQ70 363 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 VILLO15195 856 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CYP1A2P05177 515 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 KCNJ4P48050 445 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ENTPD1P49961 510 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF131P52739 623 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ADORA2A-AS1P86434 159 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CREB5Q02930 508 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 TRIM29Q14134 588 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 TWIST1Q15672 202 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF284Q2VY69 593 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ALDH1L2Q3SY69 923 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 TMEM154Q6P9G4 183 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 LINGO2Q7L985 606 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ZBTB2Q8N680 514 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC89Q8N998 374 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 URB1-AS1Q96HZ7 61 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 TMEM68Q96MH6 324 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF570Q96NI8 536 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC68Q9H2F9 335 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 SH2D4AQ9H788 454 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 PLAC1Q9HBJ0 212 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 RRP7BPQ9NSQ0 103 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CNOT8Q9UFF9 292 aaKnown RBP6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 RABL2BQ9UNT1 228 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CEPT1Q9Y6K0 416 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CFAP43Q8NDM7 1665 aa6.76□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC18Q5T9S5 1454 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 KDM4EB2RXH2 506 aaPredicted RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 TULP2O00295 520 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 NDUFB4O95168 129 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 PSG1P11464 419 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF182P17025 639 aaPredicted RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 PSMB10P40306 273 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 MC1RQ01726 317 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 PPATQ06203 517 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 TRAF1Q13077 416 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 CUL4AQ13619 759 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 KRT24Q2M2I5 525 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 USP41Q3LFD5 358 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 C6orf141Q5SZD1 244 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 OTUD1Q5VV17 481 aaPredicted RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 QSOX2Q6ZRP7 698 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 Q6ZSV7 163 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 Q6ZTK2 550 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 MIGA1Q8NAN2 632 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 SLC41A2Q96JW4 573 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 C1orf74Q96LT6 269 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 TTC14Q96N46 770 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM110AQ9BQ89 295 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 ALDH8A1Q9H2A2 487 aaPredicted RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 RWDD1Q9H446 243 aaPredicted RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 CISD1Q9NZ45 108 aaKnown RBP6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 MTMR6Q9Y217 621 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 NUDCQ9Y266 331 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 CCDC144AA2RUR9 1427 aa6.75□□□□□ -1.33
NUDCD1-204ENST00000521439 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 AGAP14A8MT82 685 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 BECN2A8MW95 431 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SLC25A12O75746 678 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 NKX2-2O95096 273 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 OR2C1O95371 312 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 IL7RP16871 459 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 CAPN2P17655 700 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 UBA7P41226 1012 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SH3BGRP55822 239 aaPredicted RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SORDQ00796 357 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 ZSCAN26Q16670 478 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 RILPL1Q5EBL4 403 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 GKAP1Q5VSY0 366 aaPredicted RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 HAPLN4Q86UW8 402 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 WDR63Q8IWG1 891 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM184AQ8NB25 1140 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SCCPDHQ8NBX0 429 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SGCDQ92629 289 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 ARHGEF26Q96DR7 871 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 FAM120BQ96EK7 910 aaKnown RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 VCPIP1Q96JH7 1222 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 CDHR1Q96JP9 859 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 C1QTNF5Q9BXJ0 243 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 SLC29A3Q9BZD2 475 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 TSPY26PQ9H489 355 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 CLK4Q9HAZ1 481 aaKnown RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 CWC15Q9P013 229 aaKnown RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 IL36RNQ9UBH0 155 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 ADD3Q9UEY8 706 aaKnown RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 ZNF215Q9UL58 517 aaPredicted RBP6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 NCOA1Q15788 1441 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 UACAQ9BZF9 1416 aa6.74□□□□□ -1.33
NUDCD1-204ENST00000521439 A8MZ25 164 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 SCAMP1O15126 338 aa6.73□□□□□ -1.33
NUDCD1-204ENST00000521439 ITM2AO43736 263 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms