RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 EPS8L2Q9H6S3 715 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 DNAJC18Q9H819 358 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 ARL15Q9NXU5 204 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 GGA3Q9NZ52 723 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 ORC3Q9UBD5 711 aaPredicted RBP4.29□□□□□ -1.72
CLK4-207ENST00000520909 CLIP2Q9UDT6 1046 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 TCEAL9Q9UHQ7 104 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 HERC5Q9UII4 1024 aaKnown RBP4.29□□□□□ -1.72
CLK4-207ENST00000520909 KIF3AQ9Y496 699 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 TIAM2Q8IVF5 1701 aa4.29□□□□□ -1.72
CLK4-207ENST00000520909 COL2A1P02458 1487 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 MYH1P12882 1939 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 LAMA4Q16363 1823 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 hCG_1642624A0A1W2PR95 340 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 TCRBV7S3A2A0A539 114 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ITM2AO43736 263 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 STX6O43752 255 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 PLEKHA8P1O95397 391 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 UNGP13051 313 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 EEF2P13639 858 aaKnown RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 IFNAR1P17181 557 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 GM2AP17900 193 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 EPHX2P34913 555 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 THPOP40225 353 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 GNAQP50148 359 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 CYP2J2P51589 502 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 CASP5P51878 434 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 RCAN1P53805 252 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 CDH12P55289 794 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 BNC1Q01954 994 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ICA1Q05084 483 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ZBTB16Q05516 673 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 TROAPQ12815 778 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ILF3Q12906 894 aaKnown RBP eCLIP4.28□□□□□ -1.72
CLK4-207ENST00000520909 GRM4Q14833 912 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 PPP2R5BQ15173 497 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 CCDC6Q16204 474 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 EFHC1Q5JVL4 640 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 RETSATQ6NUM9 610 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 TMEM179Q6ZVK1 233 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 USP50Q70EL3 339 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 TRABD2AQ86V40 505 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 POC1AQ8NBT0 407 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 FAM110DQ8TAY7 271 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 TMEM163Q8TC26 289 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 WDR60Q8WVS4 1066 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 PIBF1Q8WXW3 757 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 DCPSQ96C86 337 aaKnown RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 C8orf76Q96K31 380 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 FRMD8Q9BZ67 464 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 CCDC134Q9H6E4 229 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 RBM28Q9NW13 759 aaKnown RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 NYAP2Q9P242 653 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 PGAP2Q9UHJ9 254 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ISY1Q9ULR0 285 aaKnown RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 RAI2Q9Y5P3 530 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 COPG1Q9Y678 874 aaKnown RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 NAV1Q8NEY1 1877 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 WDR81Q562E7 1941 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 ZNF646O15015 1829 aaPredicted RBP4.28□□□□□ -1.72
CLK4-207ENST00000520909 PSME4Q14997 1843 aa4.28□□□□□ -1.72
CLK4-207ENST00000520909 PLIN4Q96Q06 1357 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 SAA2-SAA4A0A096LPE2 208 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 FAM234BA2RU67 622 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 ERI2A8K979 691 aaKnown RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 KLRF2D3W0D1 207 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 GOLGA8HP0CJ92 632 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 ENO3P13929 434 aaPredicted RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 FDPSP14324 419 aaKnown RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 NOVP48745 357 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 VEGFCP49767 419 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 TAF6P49848 677 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 PRKG1Q13976 671 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 TRIM29Q14134 588 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 CCDC96Q2M329 555 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 STPG1Q5TH74 334 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 TMTC3Q6ZXV5 915 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 C14orf80Q86SX3 495 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 SRBD1Q8N5C6 995 aaKnown RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 ACER1Q8TDN7 264 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 LZTS2Q9BRK4 669 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 UBA5Q9GZZ9 404 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 TAF1DQ9H5J8 278 aaPredicted RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 VAT1LQ9HCJ6 419 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 MAD2L2Q9UI95 211 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 AGO1Q9UL18 857 aaKnown RBP4.27□□□□□ -1.73
CLK4-207ENST00000520909 MTMR6Q9Y217 621 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 SBF1O95248 1867 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 CDK5RAP2Q96SN8 1893 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 NID2Q14112 1375 aa4.27□□□□□ -1.73
CLK4-207ENST00000520909 IGHV4-28A0A0C4DH34 117 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 F5H6K3 240 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 TMCC1O94876 653 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 DEXIO95424 95 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 BAG4O95429 457 aaKnown RBP4.26□□□□□ -1.73
CLK4-207ENST00000520909 GLP2RO95838 553 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 NDUFB10O96000 172 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 HLA-DQA2P01906 255 aa4.26□□□□□ -1.73
CLK4-207ENST00000520909 ANXA6P08133 673 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms