RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 NUP85Q9BW27 656 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 GSDMCQ9BYG8 508 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 FRMD8Q9BZ67 464 aaPredicted RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 NT5MQ9NPB1 228 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 SPATS2LQ9NUQ6 558 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 IP6K2Q9UHH9 426 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 ANAPC7Q9UJX3 599 aa15.16■□□□□ 0.02
CSMD1-207ENST00000520451 BZW2Q9Y6E2 419 aaKnown RBP15.16■□□□□ 0.02
CSMD1-207ENST00000520451 PSMD11O00231 422 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 FUCA1P04066 466 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 CTPS1P17812 591 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 ITIH1P19827 911 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 SSR1P43307 286 aaKnown RBP15.15■□□□□ 0.02
CSMD1-207ENST00000520451 PTPRRQ15256 657 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 AMZ1Q400G9 498 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 PHF19Q5T6S3 580 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 Q6ZVL8 140 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 TMPRSS9Q7Z410 1059 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 NRROSQ86YC3 692 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 CBARPQ8N350 705 aaPredicted RBP15.15■□□□□ 0.02
CSMD1-207ENST00000520451 ZDHHC1Q8WTX9 485 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 PTCD2Q8WV60 388 aaKnown RBP15.15■□□□□ 0.02
CSMD1-207ENST00000520451 SCRN2Q96FV2 425 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 MCCC1Q96RQ3 725 aaPredicted RBP15.15■□□□□ 0.02
CSMD1-207ENST00000520451 SEMA4CQ9C0C4 833 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 TAAR2Q9P1P5 351 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 ACSL6Q9UKU0 697 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 SUFUQ9UMX1 484 aa15.15■□□□□ 0.02
CSMD1-207ENST00000520451 AHCTF1Q8WYP5 2266 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 PRAMEF33A0A0G2JMD5 474 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 RHPN2P1A8MT19 583 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 NVLO15381 856 aaKnown RBP15.14■□□□□ 0.01
CSMD1-207ENST00000520451 PRAMEF10O60809 474 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 FGF1P05230 155 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 KRT10P13645 584 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 AK4P27144 223 aaPredicted RBP15.14■□□□□ 0.01
CSMD1-207ENST00000520451 TEAD1P28347 426 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 POLD2P49005 469 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 OR1D5P58170 312 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 B4GALNT1Q00973 533 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 ITKQ08881 620 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 MMRN1Q13201 1228 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 TGIF1Q15583 401 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 DOK6Q6PKX4 331 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 SLC30A9Q6PML9 568 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 SLITRK4Q8IW52 837 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 PIH1D2Q8WWB5 315 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 SYN2Q92777 582 aaPredicted RBP15.14■□□□□ 0.01
CSMD1-207ENST00000520451 TMEM159Q96B96 161 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 CMKLR1Q99788 373 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 SEMA3CQ99985 751 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 SEMA6CQ9H3T2 930 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 RDH14Q9HBH5 336 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 TRNAU1APQ9NX07 287 aaKnown RBP15.14■□□□□ 0.01
CSMD1-207ENST00000520451 RCOR3Q9P2K3 495 aaPredicted RBP15.14■□□□□ 0.01
CSMD1-207ENST00000520451 UNC13CQ8NB66 2214 aa15.14■□□□□ 0.01
CSMD1-207ENST00000520451 A0A0U1RQS6 177 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 MYO1FO00160 1098 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 B4GAT1O43505 415 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 MFSD11O43934 449 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 ECEL1O95672 775 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 SERPING1P05155 500 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 CYP1A2P05177 515 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 IVLP07476 585 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 PDHA1P08559 390 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 CD48P09326 243 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 LIPCP11150 499 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 ALDH4A1P30038 563 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 GJC1P36383 396 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 ETV5P41161 510 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 GPR1P46091 355 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 MAPK10P53779 464 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 TPM4P67936 248 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 FANCCQ00597 558 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 CTBSQ01459 385 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 BIRC2Q13490 618 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 HADHQ16836 314 aaKnown RBP15.13■□□□□ 0.01
CSMD1-207ENST00000520451 LRRC66Q68CR7 880 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 RFLNAQ6ZTI6 216 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 TECPR1Q7Z6L1 1165 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 PIM3Q86V86 326 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 C17orf82Q86X59 251 aaPredicted RBP15.13■□□□□ 0.01
CSMD1-207ENST00000520451 LRRC49Q8IUZ0 686 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 NDUFAF2Q8N183 169 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 TEX26Q8N6G2 289 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 FUCA2Q9BTY2 467 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 POLR1EQ9GZS1 481 aaKnown RBP15.13■□□□□ 0.01
CSMD1-207ENST00000520451 CD84Q9UIB8 345 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 SLC17A4Q9Y2C5 497 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 PPIL1Q9Y3C6 166 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 PIEZO2Q9H5I5 2752 aa15.13■□□□□ 0.01
CSMD1-207ENST00000520451 COL6A6A6NMZ7 2263 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 A0A087X0T9 212 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 ZW10O43264 779 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 EFSO43281 561 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 CPNE6O95741 557 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 FAM228BP0C875 321 aa15.12■□□□□ 0.01
CSMD1-207ENST00000520451 IL4RP24394 825 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms