RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 DGAT2Q96PD7 388 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 ACOX2Q99424 681 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 PCGF1Q9BSM1 259 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 R3HDMLQ9H3Y0 253 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MAGIXQ9H6Y5 334 aa5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 MKKSQ9NPJ1 570 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 HINT3Q9NQE9 182 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 CISD1Q9NZ45 108 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 R3HDM2Q9Y2K5 976 aaKnown RBP5.4□□□□□ -1.54
HMGB1P46-201ENST00000520062 NCANO14594 1321 aa5.4□□□□□ -1.55
HMGB1P46-201ENST00000520062 COL11A2P13942 1736 aaPredicted RBP5.4□□□□□ -1.55
HMGB1P46-201ENST00000520062 A0A1B0GVM2 712 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 LNP1A1A4G5 178 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF814B7Z6K7 855 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 WNT9BO14905 357 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 CHRNB1P11230 501 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 SCG2P13521 617 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 MAOAP21397 527 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 METAP2P50579 478 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 GPR143P51810 404 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZNF41P51814 821 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 KRT83P78385 493 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ADORA2A-AS1P86434 159 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZXDAP98168 799 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 SNTB1Q13884 538 aaKnown RBP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 NEDD9Q14511 834 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 CRY2Q49AN0 593 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 Q5PR19 223 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 LRCH2Q5VUJ6 765 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 GGNBP1Q5YKI7 109 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 HIST2H2BCQ6DN03 193 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 HIST2H2BDQ6DRA6 164 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 CCDC186Q7Z3E2 898 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 MPLKIPQ8TAP9 179 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 PTPMT1Q8WUK0 201 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 TMEM174Q8WUU8 243 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 CEP295NLQ96MC4 621 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 GFM1Q96RP9 751 aaKnown RBP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 NUDCD1Q96RS6 583 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 SH3GL2Q99962 352 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ADPGKQ9BRR6 497 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 PRSS22Q9GZN4 317 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ESRP2Q9H6T0 727 aaKnown RBP5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 RIOX1Q9H6W3 641 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 TMEM184CQ9NVA4 438 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 MTMR10Q9NXD2 777 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 C5AR2Q9P296 337 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 PLAGL1Q9UM63 463 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 PCDHA12Q9UN75 941 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 BTBD3Q9Y2F9 522 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZMYM2Q9UBW7 1377 aa5.39□□□□□ -1.55
HMGB1P46-201ENST00000520062 ARHGEF40Q8TER5 1519 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 KANSL1LA0AUZ9 987 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 C1orf226A1L170 272 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 A6NL46 340 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 VCYO14598 125 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 ZC3H11AO75152 810 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMP9P14780 707 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 UBA1P22314 1058 aaKnown RBP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 GNLYP22749 145 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 MPGP29372 298 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 ARHGAP25P42331 645 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 SRSF1Q07955 248 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 ALCAMQ13740 583 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 SIGIRRQ6IA17 410 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 CHST3Q7LGC8 479 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 PLPPR4Q7Z2D5 763 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 SCYL3Q8IZE3 742 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 MMP21Q8N119 569 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 ENGASEQ8NFI3 743 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 OR8K5Q8NH50 307 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 DACH2Q96NX9 599 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 GAD1Q99259 594 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 ALDH8A1Q9H2A2 487 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 FZD3Q9NPG1 666 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 GPR108Q9NPR9 543 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 DECR2Q9NUI1 292 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 PAG1Q9NWQ8 432 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 AMACRQ9UHK6 382 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 WBP11Q9Y2W2 641 aaKnown RBP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 SRPRBQ9Y5M8 271 aaKnown RBP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 CLIC4Q9Y696 253 aa5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 WDR33Q9C0J8 1336 aaKnown RBP5.38□□□□□ -1.55
HMGB1P46-201ENST00000520062 GPR75-ASB3A0A0A6YYF3 556 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 KRTAP9-6A0A140TA67 174 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 TRBC2A0A5B9 178 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 KRTAP9-7A8MTY7 169 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 MAP2K7O14733 419 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ATP2A1O14983 1001 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SMAD9O15198 467 aaKnown RBP5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 GGPS1O95749 300 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SUOXP51687 545 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 ARSEP51690 589 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 TERF1P54274 439 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SELENOVP59797 346 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 SREBF2Q12772 1141 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 TFCP2Q12800 502 aa5.37□□□□□ -1.55
HMGB1P46-201ENST00000520062 MTX1Q13505 466 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms