RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 EML3Q32P44 896 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CCNJQ5T5M9 372 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 PNCKQ6P2M8 343 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 DENND1BQ6P3S1 775 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 ZBTB33Q86T24 672 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 WDR49Q8IV35 697 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 TBC1D21Q8IYX1 336 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CERS2Q96G23 380 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 C1QTNF7Q9BXJ2 289 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 SYBUQ9NX95 663 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 DTLQ9NZJ0 730 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 MAT2BQ9NZL9 334 aa13.56□□□□□ -0.24
PABPC1-208ENST00000519004 F5H423 210 aaPredicted RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 APOL1O14791 398 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 SOAT2O75908 522 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 ALPLP05186 524 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 APOA4P06727 396 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 MLNP12872 115 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 TCF3P15923 654 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 FSHRP23945 695 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 SLC9A3P48764 834 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 BCAR1P56945 870 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 CD47Q08722 323 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 KRR1Q13601 381 aaKnown RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 DAG1Q14118 895 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 ACOX1Q15067 660 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 HSDL1Q3SXM5 330 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 SH3PXD2AQ5TCZ1 1133 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 SDE2Q6IQ49 451 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 STRA8Q7Z7C7 330 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 BSNDQ8WZ55 320 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 C1QTNF1Q9BXJ1 281 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 RHOBTB2Q9BYZ6 727 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 CCDC90BQ9GZT6 254 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 TASP1Q9H6P5 420 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 IL1RL2Q9HB29 575 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 TM9SF3Q9HD45 589 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 MAP10Q9P2G4 905 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 NUP50Q9UKX7 468 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 ZNF541Q9H0D2 1346 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 SLC1A7O00341 560 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 NDUFB10O96000 172 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 CCNE2O96020 404 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 GOT2P00505 430 aaKnown RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 BDNFP23560 247 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 HCAR3P49019 387 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 MLLT6P55198 1093 aaPredicted RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 NOXA1Q86UR1 476 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 RIOX2Q8IUF8 465 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 FUNDC1Q8IVP5 155 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 OSCARQ8IYS5 282 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 PGLYRP2Q96PD5 576 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 TOR3AQ9H497 397 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 NTN4Q9HB63 628 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 PRDM11Q9NQV5 511 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 ANAPC2Q9UJX6 822 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 PNMA8BQ9ULN7 279 aaPredicted RBP13.55□□□□□ -0.24
PABPC1-208ENST00000519004 RIPK3Q9Y572 518 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 PCDHGB1Q9Y5G3 927 aa13.55□□□□□ -0.24
PABPC1-208ENST00000519004 CCDC154A6NI56 674 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 METTL15A6NJ78 407 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 PTGES3LE9PB15 166 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 H3BUI4 141 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 UPK1AO00322 258 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DLX3O60479 287 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 YES1P07947 543 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 ALOX12P18054 663 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CBLP22681 906 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DNAJB1P25685 340 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 RAD51Q06609 339 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 TBRG1Q3YBR2 411 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CNSTQ6PJW8 725 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 RBM23Q86U06 439 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 PARP16Q8N5Y8 322 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DNERQ8NFT8 737 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 GTF2H4Q92759 462 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SNAPC3Q92966 411 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 METTL2AQ96IZ6 378 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 FCRL3Q96P31 734 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 GAD1Q99259 594 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 ACAT2Q9BWD1 397 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 GON7Q9BXV9 100 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CEP41Q9BYV8 373 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 FAM49AQ9H0Q0 323 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DDX4Q9NQI0 724 aaKnown RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 KMT5AQ9NQR1 393 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 DIABLOQ9NR28 239 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 UCKL1Q9NWZ5 548 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 MORF4L1Q9UBU8 362 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-208ENST00000519004 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 CNTNAP1P78357 1384 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 MAGEB16A2A368 324 aa13.54□□□□□ -0.24
PABPC1-208ENST00000519004 TARM1B6A8C7 271 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms