RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 NMBRP28336 390 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 IGFALSP35858 605 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 PLTPP55058 493 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 RPS21P63220 83 aaKnown RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 XIAPP98170 497 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 ACVR1Q04771 509 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 DHX9Q08211 1270 aaKnown RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 CCDC15Q0P6D6 951 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 CCDC70Q6NSX1 233 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 SLC36A4Q6YBV0 504 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 CYP2U1Q7Z449 544 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 ZCCHC9Q8N567 271 aaKnown RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 PAF1Q8N7H5 531 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 DNAAF3Q8N9W5 541 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 TMEM145Q8NBT3 493 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 PLA2G15Q8NCC3 412 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 OR13J1Q8NGT2 312 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 CXorf40AQ8TE69 158 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 ASB12Q8WXK4 309 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 DNASE2BQ8WZ79 361 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 SCAMP4Q969E2 229 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 DNAJC1Q96KC8 554 aaKnown RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 SPACA7Q96KW9 195 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 BMFQ96LC9 184 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 HSPA12BQ96MM6 686 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 FCRL3Q96P31 734 aaPredicted RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 KIFC1Q9BW19 673 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 SLC17A9Q9BYT1 436 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 GPR63Q9BZJ6 419 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 PCED1AQ9H1Q7 454 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 TRABDQ9H4I3 376 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 XAB2Q9HCS7 855 aaKnown RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 CHRAC1Q9NRG0 131 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 TREX1Q9NSU2 369 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLN8-202ENST00000517514 HACD3Q9P035 362 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 NFKBIL1Q9UBC1 381 aaPredicted RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLN8-202ENST00000517514 CD84Q9UIB8 345 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 SOX13Q9UN79 622 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 TCAF1Q9Y4C2 921 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 TEX264Q9Y6I9 313 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 V9GYY5 206 aaPredicted RBP9.87□□□□□ -0.83
CLN8-202ENST00000517514 ADAMTS9Q9P2N4 1935 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 MUC6Q6W4X9 2439 aa9.87□□□□□ -0.83
CLN8-202ENST00000517514 PCDH15Q96QU1 1955 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 PI4KAP42356 2102 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 A0A1W2PPC4 97 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 POM121BA6NF01 834 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 FADS2P1A8MWK0 482 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 SMAPO00193 183 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 NEMP1O14524 444 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 SLC31A1O15431 190 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 GPR39O43194 453 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 NDUFS2O75306 463 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 PPFIA2O75334 1257 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 TM7SF2O76062 418 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 FSBPO95073 299 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 SLC4A1P02730 911 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 WNT1P04628 370 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 LPOP22079 712 aaPredicted RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 CNR2P34972 360 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 PEX6Q13608 980 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 ARHGEF7Q14155 803 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 ACOX1Q15067 660 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 IRF4Q15306 451 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 ERCC6LQ2NKX8 1250 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 PCID2Q5JVF3 399 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 HP1BP3Q5SSJ5 553 aaPredicted RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 TPRG1LQ5T0D9 272 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 TSTD2Q5T7W7 516 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 HENMT1Q5T8I9 393 aaKnown RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 ESRP1Q6NXG1 681 aaKnown RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 CES3Q6UWW8 571 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 GCNT7Q6ZNI0 430 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 ARMCX6Q7L4S7 300 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 GLT6D1Q7Z4J2 308 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 TMEM135Q86UB9 458 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 NDUFAF2Q8N183 169 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 PNPLA1Q8N8W4 532 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 BBOF1Q8ND07 529 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 OR4K2Q8NGD2 314 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 MFSD3Q96ES6 412 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 LENG8Q96PV6 779 aaPredicted RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 SRPK1Q96SB4 655 aaKnown RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 MYOCQ99972 504 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 IL22Q9GZX6 179 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 CAAP1Q9H8G2 361 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 MRM3Q9HC36 420 aaKnown RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 IL26Q9NPH9 171 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 FAM114A2Q9NRY5 505 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 TMEM74BQ9NUR3 256 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 NLE1Q9NVX2 485 aaPredicted RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 BFARQ9NZS9 450 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 FKBPLQ9UIM3 349 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 RIMKLBQ9ULI2 386 aa9.86□□□□□ -0.83
CLN8-202ENST00000517514 CNOT6Q9ULM6 557 aaKnown RBP9.86□□□□□ -0.83
CLN8-202ENST00000517514 DNAH14Q0VDD8 3507 aa9.85□□□□□ -0.83
CLN8-202ENST00000517514 ZCWPW2A0A1B0GU75 182 aa9.85□□□□□ -0.83
CLN8-202ENST00000517514 A0A1W2PR77 199 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms