RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 WHRNQ9P202 907 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ZFR2Q9UPR6 939 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 DMTF1Q9Y222 760 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 HCN4Q9Y3Q4 1203 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 ANKRD12Q6UB98 2062 aa7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 GOLGA4Q13439 2230 aaKnown RBP7.59□□□□□ -1.19
HMGXB3-204ENST00000513318 OTOGLQ3ZCN5 2332 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TCRBV7S3A2A0A539 114 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 A8MX80 341 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 LZTS3O60299 673 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MMP20O60882 483 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 PPFIA2O75334 1257 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 RECQL5O94762 991 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 FSBPO95073 299 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CLDN7O95471 211 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CRTAMO95727 393 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC4A1P02730 911 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 IGHV4-34P06331 123 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 C1SP09871 688 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 PIRTP0C851 137 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 LPOP22079 712 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 HNRNPA2B1P22626 353 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CD27P26842 260 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MAT2AP31153 395 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 HMGCLP35914 325 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 GRIA1P42261 906 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DPP6P42658 865 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MAGEA3P43357 314 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 RPL21P46778 160 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DHPSP49366 369 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 STC1P52823 247 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ITGA8P53708 1063 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TERF1P54274 439 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DRG2P55039 364 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DCDC1P59894 354 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MRPS25P82663 173 aaKnown RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SEMG2Q02383 582 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CREB5Q02930 508 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CAV1Q03135 178 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 MSLNQ13421 630 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 LAMB3Q13751 1172 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 POU6F1Q14863 301 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ACOX1Q15067 660 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TAF1AQ15573 450 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ZNF284Q2VY69 593 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 WDR45BQ5MNZ6 344 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ANKRD22Q5VYY1 191 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ARMC3Q5W041 872 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 LYSMD4Q5XG99 296 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SEL1L3Q68CR1 1132 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DUPD1Q68J44 220 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 HIBCHQ6NVY1 386 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CRTC1Q6UUV9 634 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 PRR23BQ6ZRT6 265 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CYP2U1Q7Z449 544 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TMC3Q7Z5M5 1100 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC41A1Q8IVJ1 513 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TMEFF1Q8IYR6 380 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 TTC30BQ8N4P2 665 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 BRSK1Q8TDC3 778 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DNASE2BQ8WZ79 361 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 NUS1Q96E22 293 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DTD2Q96FN9 168 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 COQ10AQ96MF6 247 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SERPINB12Q96P63 405 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SMIM14Q96QK8 99 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 RANBP9Q96S59 729 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 C19orf43Q9BQ61 176 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 C1QTNF2Q9BXJ5 285 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 FAM129AQ9BZQ8 928 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 IL22Q9GZX6 179 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 CDH19Q9H159 772 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 DPH5Q9H2P9 285 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SEMA4AQ9H3S1 761 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 BFARQ9NZS9 450 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 NFKBIL1Q9UBC1 381 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 RAB23Q9ULC3 237 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 COQ6Q9Y2Z9 468 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SNX24Q9Y343 169 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 SPO11Q9Y5K1 396 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 R4GN57 208 aa7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 ARID1BQ8NFD5 2236 aaPredicted RBP7.58□□□□□ -1.2
HMGXB3-204ENST00000513318 USP34Q70CQ2 3546 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 A0A1W2PPC4 97 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 HEATR9A2RTY3 570 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 RGSL1A5PLK6 1076 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 IGLON5A6NGN9 336 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 C2orf81A6NN90 581 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PRAMEF26H0Y7S4 382 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 GOLGA8MH3BSY2 632 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 WNT9AO14904 365 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC31A1O15431 190 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 SLU7O95391 586 aaKnown RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 PAK4O96013 591 aaPredicted RBP7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 GM2AP17900 193 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 ADRA1DP25100 572 aa7.57□□□□□ -1.2
HMGXB3-204ENST00000513318 AKT2P31751 481 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms