RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 WDR26Q9H7D7 661 aa13.96□□□□□ -0.17
DDX41-212ENST00000511040 SUDS3Q9H7L9 328 aaPredicted RBP13.96□□□□□ -0.17
DDX41-212ENST00000511040 MRPL40Q9NQ50 206 aaKnown RBP13.96□□□□□ -0.17
DDX41-212ENST00000511040 TOR4AQ9NXH8 423 aa13.96□□□□□ -0.17
DDX41-212ENST00000511040 APOBEC3BQ9UH17 382 aaKnown RBP13.96□□□□□ -0.17
DDX41-212ENST00000511040 SHOC2Q9UQ13 582 aa13.96□□□□□ -0.17
DDX41-212ENST00000511040 NCOR2Q9Y618 2525 aa13.96□□□□□ -0.18
DDX41-212ENST00000511040 GOLGA6L9A6NEM1 432 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 TMEM202A6NGA9 273 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 GCATO75600 419 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 NDST3O95803 873 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 CELA2BP08218 269 aaPredicted RBP13.95□□□□□ -0.18
DDX41-212ENST00000511040 GIMD1P0DJR0 217 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 KIAA1024LP59773 190 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 SRP54P61011 504 aaKnown RBP13.95□□□□□ -0.18
DDX41-212ENST00000511040 DEFB133Q30KQ1 61 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 SEL1L2Q5TEA6 688 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 MEI1Q5TIA1 1274 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 ZNF662Q6ZS27 426 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 HEATR4Q86WZ0 1026 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 IPMKQ8NFU5 416 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 CCDC110Q8TBZ0 833 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 AP2M1Q96CW1 435 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 PDXPQ96GD0 296 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 AGAP2Q99490 1192 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 VAT1Q99536 393 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 LRRC61Q9BV99 259 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 RIOK2Q9BVS4 552 aaKnown RBP13.95□□□□□ -0.18
DDX41-212ENST00000511040 FGF22Q9HCT0 170 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 KLQ9UEF7 1012 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 FAM153AQ9UHL3 310 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 TRHDEQ9UKU6 1024 aa13.95□□□□□ -0.18
DDX41-212ENST00000511040 APOBEC2Q9Y235 224 aaKnown RBP13.95□□□□□ -0.18
DDX41-212ENST00000511040 ARID1BQ8NFD5 2236 aaPredicted RBP13.94□□□□□ -0.18
DDX41-212ENST00000511040 AQP9O43315 295 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 STK10O94804 968 aaKnown RBP13.94□□□□□ -0.18
DDX41-212ENST00000511040 RASGRP1O95267 797 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 TSHRP16473 764 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ZNF30P17039 623 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 TRIM23P36406 574 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 CHRNA4P43681 627 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 GPR1P46091 355 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
DDX41-212ENST00000511040 SLC14A2Q15849 920 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 PROX2Q3B8N5 592 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ANKRD20A2Q5SQ80 823 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ANKRD20A1Q5TYW2 823 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ANKRD20A3Q5VUR7 823 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 CCDC70Q6NSX1 233 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 DOK6Q6PKX4 331 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 TRIM74Q86UV6 250 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 FAM71DQ8N9W8 422 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 OR56A4Q8NGH8 313 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 OR4C6Q8NH72 309 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 BTN2A2Q8WVV5 523 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ATG4AQ8WYN0 398 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 MRGPRX2Q96LB1 330 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 LYSMD1Q96S90 227 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 FERMT1Q9BQL6 677 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 GORASP1Q9BQQ3 440 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 CLPBQ9H078 707 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 GBA3Q9H227 469 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 KCNF1Q9H3M0 494 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 USP29Q9HBJ7 922 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 PHPT1Q9NRX4 125 aaPredicted RBP13.94□□□□□ -0.18
DDX41-212ENST00000511040 DNPEPQ9ULA0 475 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 ZNF711Q9Y462 761 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 SPO11Q9Y5K1 396 aa13.94□□□□□ -0.18
DDX41-212ENST00000511040 COL5A1P20908 1838 aaPredicted RBP13.93□□□□□ -0.18
DDX41-212ENST00000511040 NEMP2A6NFY4 417 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 AURKAO14965 403 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 INPP4BO15327 924 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 SOD1P00441 154 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 MYCLP1P12525 358 aaPredicted RBP13.93□□□□□ -0.18
DDX41-212ENST00000511040 CTSEP14091 401 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 PSMB4P28070 264 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 POLD2P49005 469 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 SPINT3P49223 89 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 HK3P52790 923 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 CLDN6P56747 220 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 DAB2P98082 770 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 CDK3Q00526 305 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 HS1BP3Q53T59 392 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 SIRPB2Q5JXA9 342 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 ALS2CLQ60I27 953 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 ITPRIPL1Q6GPH6 555 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 RAB44Q7Z6P3 723 aaPredicted RBP13.93□□□□□ -0.18
DDX41-212ENST00000511040 MARCH9Q86YJ5 346 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 SLC13A5Q86YT5 568 aaPredicted RBP13.93□□□□□ -0.18
DDX41-212ENST00000511040 NRSN1Q8IZ57 195 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
DDX41-212ENST00000511040 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 ATL2Q8NHH9 583 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 CCHCR1Q8TD31 782 aa13.93□□□□□ -0.18
DDX41-212ENST00000511040 PTCD2Q8WV60 388 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms