RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 RSPH10BP0C881 870 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 GAS1P54826 345 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 PMPCAQ10713 525 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 WDR93Q6P2C0 686 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 ZNF419Q96HQ0 510 aaPredicted RBP6.91□□□□□ -1.3
USP53-206ENST00000510737 WDR77Q9BQA1 342 aaPredicted RBP6.91□□□□□ -1.3
USP53-206ENST00000510737 TLE6Q9H808 572 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 FBXO4Q9UKT5 387 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 DTNAQ9Y4J8 743 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 OTOGLQ3ZCN5 2332 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 FLNBO75369 2602 aaKnown RBP6.91□□□□□ -1.3
USP53-206ENST00000510737 NKX2-8O15522 239 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 PRKAB2O43741 272 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 SP9P0CG40 484 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 ARSBP15848 533 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 FOXL2P58012 376 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 SELENOVP59797 346 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 SNAP25P60880 206 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 PMS2P11Q13670 270 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 KCNC3Q14003 757 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 BAATQ14032 418 aaPredicted RBP6.9□□□□□ -1.3
USP53-206ENST00000510737 C12orf60Q5U649 245 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 GFI1BQ5VTD9 330 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 TMEM184AQ6ZMB5 413 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 TMPRSS12Q86WS5 348 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 AFG1LQ8WV93 481 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 POF1BQ8WVV4 589 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 SEPT8Q92599 483 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 P2RX5Q93086 422 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 ZNF689Q96CS4 500 aaPredicted RBP6.9□□□□□ -1.3
USP53-206ENST00000510737 RTKNQ9BST9 563 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 ZNF556Q9HAH1 456 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 ZNF304Q9HCX3 659 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 FEM1BQ9UK73 627 aa6.9□□□□□ -1.3
USP53-206ENST00000510737 GCN1Q92616 2671 aaKnown RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 PNMA6EA0A0J9YXQ4 647 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 A0A1B0GUV1 79 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 PCDH17O14917 1159 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 HARSP12081 509 aaKnown RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 IDEP14735 1019 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 THPOP40225 353 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 GPR18Q14330 331 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 GRM4Q14833 912 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 SHBQ15464 509 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 CCDC184Q52MB2 194 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 HIBCHQ6NVY1 386 aaPredicted RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 ANKRD54Q6NXT1 300 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 RASGRP3Q8IV61 690 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 KDM1BQ8NB78 822 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 GABPB2Q8TAK5 448 aaPredicted RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 ADAD1Q96M93 576 aaKnown RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 NEK1Q96PY6 1258 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 RTP3Q9BQQ7 232 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 CRNKL1Q9BZJ0 848 aaKnown RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 C6orf106Q9H6K1 298 aaPredicted RBP6.89□□□□□ -1.31
USP53-206ENST00000510737 NYAP2Q9P242 653 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 CLIP2Q9UDT6 1046 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 PCDHGB1Q9Y5G3 927 aa6.89□□□□□ -1.31
USP53-206ENST00000510737 ADGRA3Q8IWK6 1321 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 RAD50Q92878 1312 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 HAS3O00219 553 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 GRID2O43424 1007 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 CER1O95813 267 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 MMP3P08254 477 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 TECP42680 631 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 COMPP49747 757 aaPredicted RBP6.88□□□□□ -1.31
USP53-206ENST00000510737 PMS2P54278 862 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 TAS2R50P59544 299 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 ARHGAP8P85298 464 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 DDX10Q13206 875 aaKnown RBP6.88□□□□□ -1.31
USP53-206ENST00000510737 G3BP1Q13283 466 aaKnown RBP eCLIP6.88□□□□□ -1.31
USP53-206ENST00000510737 BTG3Q14201 252 aaPredicted RBP6.88□□□□□ -1.31
USP53-206ENST00000510737 CSHL1Q14406 222 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 PPP2R5BQ15173 497 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 DUSP6Q16828 381 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 CADM3Q8N126 398 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 SCFD2Q8WU76 684 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 FAR2Q96K12 515 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 TBCBQ99426 244 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 POLDIP3Q9BY77 421 aaKnown RBP6.88□□□□□ -1.31
USP53-206ENST00000510737 POMKQ9H5K3 350 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 PRKRIP1Q9H875 184 aaPredicted RBP6.88□□□□□ -1.31
USP53-206ENST00000510737 SFXN1Q9H9B4 322 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 NBEAQ8NFP9 2946 aa6.88□□□□□ -1.31
USP53-206ENST00000510737 MYO5AQ9Y4I1 1855 aaKnown RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 ZNF432O94892 652 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 PLGP00747 810 aaPredicted RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 PROS1P07225 676 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 CASTP20810 708 aaKnown RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 ARHGAP1Q07960 439 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 GALNT3Q14435 633 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 IZUMO4Q1ZYL8 232 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 C10orf76Q5T2E6 689 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 SLC9C2Q5TAH2 1124 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 GSG1LQ6UXU4 331 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 SERINC5Q86VE9 423 aa6.87□□□□□ -1.31
USP53-206ENST00000510737 RPAP2Q8IXW5 612 aaPredicted RBP6.87□□□□□ -1.31
USP53-206ENST00000510737 MAML2Q8IZL2 1156 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms