RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 RAB44Q7Z6P3 723 aaPredicted RBP11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 CDKL3Q8IVW4 592 aaPredicted RBP11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 PHACTR4Q8IZ21 702 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 RBFAQ8N0V3 343 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 FAM181AQ8N9Y4 354 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 ZNF548Q8NEK5 533 aaPredicted RBP11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 BTN2A2Q8WVV5 523 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 ADAMTS14Q8WXS8 1223 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 SCAMP4Q969E2 229 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 MRGPRX2Q96LB1 330 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 CLPBQ9H078 707 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 KCNF1Q9H3M0 494 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 NLGN3Q9NZ94 848 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 UBP1Q9NZI7 540 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 DGKBQ9Y6T7 804 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 U3KQA8 63 aa11.73□□□□□ -0.53
HMGXB3-203ENST00000510472 RGSL1A5PLK6 1076 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ENC1O14682 589 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 TPP1O14773 563 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 AQP9O43315 295 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 TRIM16O95361 564 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 LDOC1O95751 146 aaPredicted RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 CEACAM5P06731 702 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 CKMT2P17540 419 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 KCNA4P22459 653 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 HTR1BP28222 390 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ADRA1AP35348 466 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SPINT3P49223 89 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SRP54P61011 504 aaKnown RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 MSLNQ13421 630 aaPredicted RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 GALNT3Q14435 633 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ANKRD20A2Q5SQ80 823 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ANKRD20A1Q5TYW2 823 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ANKRD20A3Q5VUR7 823 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 DENND2CQ68D51 928 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 DARS2Q6PI48 645 aaKnown RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ENPP7Q6UWV6 458 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 ADAMTSL4Q6UY14 1074 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 RANBP10Q6VN20 620 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SLC13A5Q86YT5 568 aaPredicted RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 REXO1L1PQ8IX06 675 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 PNPLA1Q8N8W4 532 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 TRIM58Q8NG06 486 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 OR1E3Q8WZA6 343 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 TSACCQ96A04 125 aaPredicted RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 CNDP2Q96KP4 475 aaKnown RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 WDR92Q96MX6 357 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SPATA13Q96N96 652 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 AGAP2Q99490 1192 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 LRRC61Q9BV99 259 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 GBA3Q9H227 469 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 CARD9Q9H257 536 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 WDR26Q9H7D7 661 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 FGF22Q9HCT0 170 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 FTSJ1Q9UET6 329 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 CNOT6Q9ULM6 557 aaKnown RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 APOBEC2Q9Y235 224 aaKnown RBP11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 PCDHGA1Q9Y5H4 931 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SPO11Q9Y5K1 396 aa11.72□□□□□ -0.53
HMGXB3-203ENST00000510472 SHROOM3Q8TF72 1996 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 LMO7DNF2Z398 122 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 H3BM21 787 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 CACNB4O00305 520 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 YY2O15391 372 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 KCNN4O15554 427 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 NRDCO43847 1150 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 ZNF189O75820 626 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 RASGRP1O95267 797 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 MYCLP1P12525 358 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 ACADVLP49748 655 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 BLKP51451 505 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 CDK3Q00526 305 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 DNAJC3Q13217 504 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 MPP3Q13368 585 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 SIX1Q15475 284 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 OASLQ15646 514 aaKnown RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 SLC1A5Q15758 541 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 PCSK7Q16549 785 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 PRRT3Q5FWE3 981 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 HENMT1Q5T8I9 393 aaKnown RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 FAXCQ5TGI0 409 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 LYSMD3Q7Z3D4 306 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 HEATR4Q86WZ0 1026 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 SDR16C5Q8N3Y7 309 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 CHCHD4Q8N4Q1 142 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 OR56A4Q8NGH8 313 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 ATL2Q8NHH9 583 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 CCDC110Q8TBZ0 833 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 AP2M1Q96CW1 435 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 SCARF2Q96GP6 870 aaPredicted RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 COX14Q96I36 57 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 SRPK1Q96SB4 655 aaKnown RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 RIOK2Q9BVS4 552 aaKnown RBP11.71□□□□□ -0.53
HMGXB3-203ENST00000510472 FRMD8Q9BZ67 464 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms