RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PCDH8O95206 1070 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 PAK4O96013 591 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TRBC1P01850 177 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 APOC2P02655 101 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 PIRTP0C851 137 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 THEGLP0DJG4 465 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 MX2P20592 715 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CD38P28907 300 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SERPINA4P29622 427 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 VIPR1P32241 457 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 HNF1BP35680 557 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 HSPA9P38646 679 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ID4P47928 161 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CLDN6P56747 220 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 RWDD2BP57060 319 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 BCL2L1Q07817 233 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 AP1B1Q10567 949 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 KIF5AQ12840 1032 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 BNIP3Q12983 259 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 MSLNQ13421 630 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TLR1Q15399 786 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 OASLQ15646 514 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 C11orf91Q3C1V1 193 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SETMARQ53H47 684 aaPredicted RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ZNF542PQ5EBM4 170 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SYCP2LQ5T4T6 812 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 NEK5Q6P3R8 708 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 FBXL19Q6PCT2 694 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 BRAT1Q6PJG6 821 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CRTC1Q6UUV9 634 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 DBX2Q6ZNG2 339 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 PEX26Q7Z412 305 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TECPR1Q7Z6L1 1165 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ZC3H18Q86VM9 953 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ATCAYQ86WG3 371 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CCDC50Q8IVM0 306 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 MAP7D3Q8IWC1 876 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CCDC112Q8NEF3 446 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 DENND6BQ8NEG7 585 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 LPCAT1Q8NF37 534 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CEP76Q8TAP6 659 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 KIAA1524Q8TCG1 905 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SAP25Q8TEE9 199 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ASB12Q8WXK4 309 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 RAB7BQ96AH8 199 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 DTD2Q96FN9 168 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TEKT5Q96M29 485 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 AGAP3Q96P47 875 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 NUSAP1Q9BXS6 441 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SLC17A9Q9BYT1 436 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 POLR1EQ9GZS1 481 aaKnown RBP7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 GLOD4Q9HC38 313 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 FGF22Q9HCT0 170 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 AASDHPPTQ9NRN7 309 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SEPT10Q9P0V9 454 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 SUSD2Q9UGT4 822 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 GUCA1BQ9UMX6 200 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 DMTF1Q9Y222 760 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 CHKBQ9Y259 395 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 TTLL3Q9Y4R7 772 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 ST14Q9Y5Y6 855 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 PLXNB3Q9ULL4 1909 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 IGF2RP11717 2491 aa7.22□□□□□ -1.25
TOPBP1-207ENST00000509162 PRR5-ARHGAP8B1AHC4 643 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PRAMEF26H0Y7S4 382 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TLR4O00206 839 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 GAPDHSO14556 408 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PPP1R12AO14974 1030 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 SCAMP1O15126 338 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 RECQL5O94762 991 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ZRANB2O95218 330 aaKnown RBP eCLIP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 FUCA1P04066 466 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PDGFAP04085 211 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PCCBP05166 539 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 CCDC175P0C221 793 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 MYF5P13349 255 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PSMB4P28070 264 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ADRA1AP35348 466 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ETV3P41162 512 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 DPP6P42658 865 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 STC1P52823 247 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 RPS21P63220 83 aaKnown RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ARHGAP8P85298 464 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 RELBQ01201 579 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PTSQ03393 145 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TFDP2Q14188 446 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PDK1Q15118 436 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ALG11Q2TAA5 492 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 UAP1L1Q3KQV9 507 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 ZFYVE27Q5T4F4 411 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LRRC66Q68CR7 880 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TIGD7Q6NT04 549 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PSAPL1Q6NUJ1 521 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 XKR5Q6UX68 686 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 Q6ZSR6 202 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LYSMD3Q7Z3D4 306 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 PTAR1Q7Z6K3 402 aaPredicted RBP7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TTC7BQ86TV6 843 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 TRIM74Q86UV6 250 aa7.21□□□□□ -1.26
TOPBP1-207ENST00000509162 LRRC49Q8IUZ0 686 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms