RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 STX1BP61266 288 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 STX5Q13190 355 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 IHHQ14623 411 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 RBBP5Q15291 538 aaKnown RBP10.96□□□□□ -0.65
SEC31A-228ENST00000509142 MAPRE2Q15555 327 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 AGKQ53H12 422 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 NADSYN1Q6IA69 706 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 PGAM4Q8N0Y7 254 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 PELI3Q8N2H9 469 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 MYEOVQ96EZ4 313 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 SPATA17Q96L03 361 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 LRGUKQ96M69 825 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 PCDHAC1Q9H158 963 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 HMX1Q9NP08 348 aaPredicted RBP10.96□□□□□ -0.65
SEC31A-228ENST00000509142 CCDC167Q9P0B6 97 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 C6orf203Q9P0P8 240 aaPredicted RBP10.96□□□□□ -0.65
SEC31A-228ENST00000509142 APPL1Q9UKG1 709 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 AP4B1Q9Y6B7 739 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 NLRC5Q86WI3 1866 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 C7orf72A4D263 438 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 ARVCFO00192 962 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 MUSKO15146 869 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 NDST3O95803 873 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 IRF1P10914 325 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 ME2P23368 584 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 C1QTNF8P60827 252 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 RPS24P62847 133 aaKnown RBP10.96□□□□□ -0.65
SEC31A-228ENST00000509142 YBX1P67809 324 aaKnown RBP10.96□□□□□ -0.65
SEC31A-228ENST00000509142 GRIN3AQ8TCU5 1115 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 PCDHGA7Q9Y5G6 932 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 ACTL7AQ9Y615 435 aa10.96□□□□□ -0.65
SEC31A-228ENST00000509142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 ATP6AP2A0A1C7CYW4 349 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CBX4O00257 560 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 FBP2O00757 339 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 NDUFS3O75489 264 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CRCPO75575 148 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 ATP6AP2O75787 350 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 MYCP01106 439 aaPredicted RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 RPL17P18621 184 aaKnown RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 NOGQ13253 232 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 ZNF177Q13360 481 aaPredicted RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 PTK2BQ14289 1009 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 FASTKQ14296 549 aaKnown RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 HERC3Q15034 1050 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CLEC6AQ6EIG7 209 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 SPATA24Q86W54 205 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 UBXN10Q96LJ8 280 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CASD1Q96PB1 797 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CDK5RAP1Q96SZ6 601 aaKnown RBP10.96□□□□□ -0.66
SEC31A-228ENST00000509142 CENPKQ9BS16 269 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 MAGEH1Q9H213 219 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 MRGBPQ9NV56 204 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 HTTP42858 3142 aa10.96□□□□□ -0.66
SEC31A-228ENST00000509142 PSMD12O00232 456 aaPredicted RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 BCAS2O75934 225 aaPredicted RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 EPOP01588 193 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 GALTP07902 379 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 RHOCP08134 193 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ZNF26P17031 533 aaPredicted RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 IMPDH1P20839 514 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 OR1D2P34982 312 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ALDH7A1P49419 539 aaKnown RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 INHBCP55103 352 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 NADK2Q4G0N4 442 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 IL23RQ5VWK5 629 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 PCDH20Q8N6Y1 951 aaKnown RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 PTGR2Q8N8N7 351 aaPredicted RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 FBXO22Q8NEZ5 403 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ATP6V1E2Q96A05 226 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 SLCO4A1Q96BD0 722 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 CNBD2Q96M20 576 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 TSEN34Q9BSV6 310 aaKnown RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 TRMOQ9BU70 441 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ELAC1Q9H777 363 aaKnown RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 SCUBE2Q9NQ36 999 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 MARCH5Q9NX47 278 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ETAA1Q9NY74 926 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 EPS15L1Q9UBC2 864 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 FAM50BQ9Y247 325 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 LZTS1Q9Y250 596 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 MIA3Q5JRA6 1907 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 HOXA2O43364 376 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 TSPAN3O60637 253 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 HOXB8P17481 243 aaPredicted RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 PFKFB4Q16877 469 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 KIF19Q2TAC6 998 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 MYLK3Q32MK0 819 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 HECTD3Q5T447 861 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 TAS1R1Q7RTX1 841 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 GLT6D1Q7Z4J2 308 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 ISCA2Q86U28 154 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 GALNT4Q8N4A0 578 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 EFHBQ8N7U6 833 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 MRPL9Q9BYD2 267 aaKnown RBP10.95□□□□□ -0.66
SEC31A-228ENST00000509142 SLC2A11Q9BYW1 496 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 MUC3BQ9H195 1237 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 HSFX1Q9UBD0 423 aa10.95□□□□□ -0.66
SEC31A-228ENST00000509142 TANC1Q9C0D5 1861 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms