RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 SPARCP09486 303 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSPY3P0CV98 308 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSPY8P0CW00 308 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 HOXC13P31276 330 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 COPB2P35606 906 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TSPY1Q01534 308 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 SLC18A2Q05940 514 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 CUL4AQ13619 759 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 DHX34Q14147 1143 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 WTAPQ15007 396 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 SLC18A3Q16572 532 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 ENOSF1Q7L5Y1 443 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 PRSS45Q7RTY3 260 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 MAB21L3Q8N8X9 362 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 LRRC8CQ8TDW0 803 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TMEM170AQ8WVE7 144 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 CNOT9Q92600 299 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 FEM1CQ96JP0 617 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 OR1F2PQ96R84 312 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TRMT61BQ9BVS5 477 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 AP1M1Q9BXS5 423 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 SYNCQ9H7C4 482 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 EBF2Q9HAK2 575 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TLR8Q9NR97 1041 aaKnown RBP4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 ANKEF1Q9NU02 776 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 ANKRD10Q9NXR5 420 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 NKIRAS2Q9NYR9 191 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 TAS2R10Q9NYW0 307 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 OR6C3Q9NZP0 311 aa4.28□□□□□ -1.72
TRAPPC13-209ENST00000508304 IGKV3D-20A0A0C4DH25 116 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ARHGAP10A1A4S6 786 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 PLOD3O60568 738 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 HNRNPCL1O60812 293 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 SCGB1D1O95968 90 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 CRYAAP02489 173 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF883P0CG24 379 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 PCNAP12004 261 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZNF8P17098 575 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 NFKBIAP25963 317 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 FMO4P31512 558 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ACTN2P35609 894 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 RARSP54136 660 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 TERF1P54274 439 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 YWHAZP63104 245 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 DCTN2Q13561 401 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 RUNX2Q13950 521 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 TBCEQ15813 527 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 SPECC1Q5M775 1068 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 CES5AQ6NT32 575 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 GALNT5Q7Z7M9 940 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ADGRG6Q86SQ4 1221 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 MON1AQ86VX9 555 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 RPAP2Q8IXW5 612 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 CCDC105Q8IYK2 499 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 TAGAPQ8N103 731 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ETNPPLQ8TBG4 499 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ZCCHC10Q8TBK6 192 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 LRFN5Q96NI6 719 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 FTOQ9C0B1 505 aaKnown RBP eCLIP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 INTS2Q9H0H0 1204 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 SLC25A18Q9H1K4 315 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 TAOK3Q9H2K8 898 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 GHITMQ9H3K2 345 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 STN1Q9H668 368 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 ADD3Q9UEY8 706 aaKnown RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 RSF1Q96T23 1441 aaPredicted RBP4.27□□□□□ -1.73
TRAPPC13-209ENST00000508304 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 AHCYL1O43865 530 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 ATP2C2O75185 946 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CCNDBP1O95273 360 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 PMS2P2O95744 297 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 AMBPP02760 352 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 IGHV4-30-4P0DP06 118 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 UBL4AP11441 157 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 KRT5P13647 590 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 AKR1B1P15121 316 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CD72P21854 359 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 GPD2P43304 727 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 HARS2P49590 506 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CDH15P55291 814 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 SNX16P57768 344 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CHAF1BQ13112 559 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 NAA25Q14CX7 972 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 PSMD6Q15008 389 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CALCRLQ16602 461 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 FBXO43Q4G163 708 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 SFTPA2Q8IWL1 248 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CPXM2Q8N436 756 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 AADATQ8N5Z0 425 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 NFKBIDQ8NI38 313 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 CALML4Q96GE6 196 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 SERINC2Q96SA4 455 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 SEPT11Q9NVA2 429 aaKnown RBP4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 HDAC6Q9UBN7 1215 aa4.26□□□□□ -1.73
TRAPPC13-209ENST00000508304 TBC1D29Q9UFV1 150 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms